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Follow the latest publications from the Faculty of Natural Sciences.

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Dasari, D. & Mølmer, K. (2012). Effect of qubit losses on Grover's quantum search algorithm. Physical Review A, 86(4), 042321. https://doi.org/10.1103/PhysRevA.86.042321

Farjami, E., Campos, R. & Ferapontova, E. (2012). Effect of the DNA end of tethering to electrodes on electron transfer in methylene blue-labeled DNA duplexes. Langmuir, 28(46), 16218-16226. https://doi.org/10.1021/la3032336

Appalakondaiah, S., Vaitheeswaran, G., Lebègue , S., Christensen, N. E. & Svane, A. (2012). Effect of van der Waals interactions on the structural and elastic properties of black phosphorus. Physical Review B, 86(3), 035105. https://doi.org/10.1103/PhysRevB.86.035105

Kelly, O., Calvert, C. R., Greenwood, J. B., Zettergren, H., Nielsen, S. B. & Wyer, J. A. (2012). Effects of Charge Location on the Absorptions and Lifetimes of Protonated Tyrosine Peptides in Vacuo. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 116(7), 1701-1709. https://doi.org/10.1021/jp208578w

Piwpuan, N. & Brix, H. (2012). Effects of different NH₄⁺ concentrations on growth and some physiological responses of Cyperus laevigatus. Abstract from Proceedings from the 7th SWS 2012 European Chapter Meeting, Aarhus, Denmark.

Nielsen, L. T., Hallegraeff, G. M., Wright, S. W. & Hansen, P. J. (2012). Effects of experimental seawater acidification on an estuarine plankton community. Aquatic Microbial Ecology, 65(3), 271-285. https://doi.org/10.3354/ame01554

Rasmussen, J., Olesen, B. & Krause-Jensen, D. (2012). Effects of filamentous macroalgae mats on growth and survival of eelgrass, Zostera marina, seedlings. Aquatic Botany, 99, 41-48. https://doi.org/10.1016/j.aquabot.2012.01.005

Lefevre, S., Huong, D. T. T., Phuong, N. T., Wang, T. & Bayley, M. (2012). Effects of hypoxia on the partitioning of oxygen uptake and the rise in metabolism during digestion in the air-breathing fish Channa striata. Aquaculture, 364-365(2012), 137-142. https://doi.org/10.1016/j.aquaculture.2012.08.019

Jampeetong, A., Brix, H. & Kantawanichkul, S. (2012). Effects of inorganic nitrogen forms on growth, morphology, nitrogen uptake capacity and nutrient allocation of four tropical aquatic macrophytes (Salvinia cucullata, Ipomoea aquatica, Cyperus involucratus and Vetiveria zizanioides). Aquatic Botany, 97(1), 10-16. https://doi.org/10.1016/j.aquabot.2011.10.004

Gelorini, V., Verbeken, A., Lens, L., Eggermont, H., Odgaard, B. V. & Verschuren, D. (2012). Effects of land use on the fungal spore richness in small crater-lake basins of western Uganda. Fungal Diversity, 55(1), 125-142. https://doi.org/10.1007/s13225-012-0155-z

Karl, I., Michalowsky, C., Sørensen, J. G., Loeschcke, V. & Fischer, K. (2012). Effects of rearing and induction temperature on the temporal dynamics of heat shock protein 70 expression in a butterfly. Physiological Entomology, 37, 103-108. https://doi.org/10.1111/j.1365-3032.2011.00814.x

Salazar, E. L., Huo, P., Hansen, J. Ø., Rieboldt, F., Bechstein, R., Wei, Y., Streber, R., Porsgaard, S., Li, Z., Lægsgaard, E., Wendt, S. & Besenbacher, F. (2012). Effects of the crystal reduction state on the interaction of oxygen with rutile Tio2(110). Catalysis Today, 182, 25. https://doi.org/10.1016/j.cattod.2011.09.038

Sneskov, K. & Stanton, J. (2012). Effects of vibrational averaging on coupled cluster calculations of spin-spin coupling constants for hydrocarbons. Molecular Physics. https://doi.org/10.1080/00268976.2012.678904

Golubeva, N. & Imparato, A. (2012). Efficiency at Maximum Power of Interacting Molecular Machines. Physical Review Letters, 109, 190602. https://doi.org/10.1103/PhysRevLett.109.190602

Golubeva, N. (2012). Efficiency of Molecular Machines with Continuous Phase Space. Poster session presented at 3rd Nordic Workshop on Statistical Physics, Stockholm, Sweden.

Golubeva, N., Imparato, A. & Peliti, L. (2012). Efficiency of Molecular Machines with Continuous Phase Space. Europhysics Letters, 97(6), 60005. https://doi.org/10.1209/0295-5075/97/60005

Jain, S. K., Bjerring, M. & Nielsen, N. C. (2012). Efficient and Robust Heteronuclear Cross-Polarization for High-Speed-Spinning Biological Solid-State NMR Spectroscopy. The Journal of Physical Chemistry Letters, 3, 703-708.

Jowhari, H. (2012). Efficient Communication Protocols for Deciding Edit Distance. Lecture Notes in Computer Science, 7501, 648-658 . https://doi.org/10.1007/978-3-642-33090-2_56

Tsirogiannis, C., Sandel, B. S. & Cheliotis, D. (2012). Efficient Computation of Popular Phylogenetic Tree Measures. Lecture Notes in Computer Science, 7534, 30-43. https://doi.org/10.1007/978-3-642-33122-0_3

Behroozmand, A., Auken, E., Fiandaca, G., Christiansen, A. V. & Christensen, N. B. (2012). Efficient full decay inversion of MRS data with a stretched-exponential approximation of the T2* distribution. Geophysical Journal International, 190(2), 900-912. https://doi.org/10.1111/j.1365-246X.2012.05558.x

Poulsen, G., Miroshnychenko, Y. & Drewsen, M. (2012). Efficient ground-state cooling of an ion in a large room-temperature linear Paul trap with a sub-Hertz heating rate. Physical Review A, 86(5), 051402(R). https://doi.org/10.1103/PhysRevA.86.051402

Hazay, C., Mikkelsen, G. L., Rabin, T. & Toft, T. (2012). Efficient RSA Key Generation and Threshold Paillier in the Two-Party Setting. Lecture Notes in Computer Science, 7178, 313-331. https://doi.org/10.1007/978-3-642-27954-6_20

Hazay, C. & Nissim , K. (2012). Efficient Set Operations in the Presence of Malicious Adversaries. Journal of Cryptology, 25(3), 383-433 . https://doi.org/10.1007/s00145-011-9098-x

Mikkelsen, G. L., Keller, M. & Rupp, A. (2012). Efficient Threshold Zero-Knowledge with Applications to User-Centric Protocols. Lecture Notes in Computer Science, 7412, 147-166 . https://doi.org/10.1007/978-3-642-32284-6_9

Sørensen, P. K., V. Fedorov, D., S. Jensen, A. & Zinner, N. T. (2012). Efimov Physics and the Three-Body Parameter within a Two-Channel Framework. Physical Review A, 86(5). https://doi.org/10.1103/PhysRevA.86.052516

Zinner, N. T. (2012). Efimov Trimers near the Zero-crossing of a Feshbach Resonance. Few-Body Systems. https://doi.org/10.1007/s00601-012-0453-8

Kragh, H. (2012, Aug). Eight physicists and astronomers: biographical portraits. http://arxiv.org/abs/1208.3114

Abi, A. & Ferapontova, E. (2012). Electrochemical Beacon Genosensors for Cancer Diagnosis. Abstract from DNA - NanoSensors. International Symposium, Jena, Germany.

Shipovskov, S., Saunders, A. M., Nielsen, J. S., Hansen, M. N., Gothelf, K. V. & Ferapontova, E. (2012). Electrochemical sandwich assay for attomole analysis of DNA and RNA from beer spoilage bacteria Lactobacillus brevis. Biosensors and Bioelectronics, 37, 99-106. https://doi.org/10.1016/j.bios.2012.05.001

Nguyen, D. D., Jones, N. C., Hoffmann, S. V., Andersen, S. H., Thulstrup, P. W. & Spanget-Larsen, J. (2012). Electronic states of 1,4-bis(phenylethynyl)benzene. A synchrotron radiation linear dichroism investigation. Chemical Physics, 392, 130-135. https://doi.org/10.1016/j.chemphys.2011.10.036

Sério, S., Nunes, Y., Hoffmann, S. V., Mason, N. J., Duflot, D. & Limão-Vieira, P. (2012). Electronic State Spectroscopy of 1,4-Pentadiene As Studied by VUV Photoabsorption Spectroscopy and ab Initio Calculations. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 116, 8176−8184. https://doi.org/10.1021/jp305905j

Ram, S., Kanchana, V., Vaitheeswaran, G., Svane, A., Dugdale, S. B. & Christensen, N. E. (2012). Electronic topological transition in LaSn₃ under pressure. Physical Review B, 85(17), 174531. https://doi.org/10.1103/PhysRevB.85.174531

Jensen, S. K. (2012). Electron Structure Calculations to Facilitate the Analysis of the Picosecond Dynamics Following UV Excitation of (i): aqueous nitrate and (ii): an aqueous DNA Nucleotide. Abstract from The 2nd Visegrad Symposium on Structural Systems Biology, Gyöngyöstarján, Hungary. http://sssb.prf.jcu.cz/2012/index.php/program

Ferapontova, E., Fernandez, E., Larsson, J. T., Munro, A. W., Gorton, L. & von Wachenfeldt, C. (2012). Electron Transfer Reactions and Cyanide Binding of Truncated Hemoglobin from Bacillus subtilis. Abstract from The 63rd Annual Meeting of the International Society of Electrochemistry, Prague, Czech Republic.

Ferapontova, E. (2012). Electron Transfer Reactions in Redox-Labeled DNA Thethered to Electrodes. Abstract from Self Assembly and Molecular Electronics, Aalborg, Denmark.

Thielsen, K. D., Moser, J. M., Schmitt-John, T., Jensen, K. & Holm, M. M. (2012). Electrophysiological and structural analyses in the hippocampus of the wobbler mouse model of ALS. Poster session presented at Synaptic wiring specificity and network dynamics in the brain, The Brain Prize and DSfN, Sønderborg, Denmark.

Cozzi, F., Kwame Aboh, I. J., Henriksson, D., Laursen, J., Lundin, M., Glasius, M. & Pind, N. (2012). Elemental characterization by EDXRF and source identification of PM2.5 aerosols originating from an urban site. Abstract from NOSA 2012, Helsingør, Denmark.

Cozzi, F., Kwame Aboh, I. J., Herniksson, D., Laursen, J., Lundin, M., Glasius, M. & Pind, N. (2012). Elemental characterization by EDXRF and source identification of PM2.5 aerosols originating from an urban site. Poster session presented at NOSA 2012, Helsingør, Denmark.

Eller, F. P. & Brix, H. (2012). Elevated CO₂ alters the phenotypic plasticity of Phragmites australis with respect to temperature and nutrient availability. Abstract from Proceedings from the 7th SWS 2012 European Chapter Meeting, Aarhus, Denmark.

Chernyy, S., Bousquet, A., Torbensen, K., Iruthayaraj, J., Ceccato, M., Pedersen, S. U., Daasbjerg, K. & Iruthayaraj, J. (2012). Elucidation of the Mechanism of Redox Grafting of Diazotated Anthraquinone. Langmuir, 28(25), 9573–9582. https://doi.org/10.1021/la301391s

Chernyy, S., Iruthayaraj, J., Ceccato, M., Hinge, M., Pedersen, S. U. & Daasbjerg, K. (2012). Elucidation of the Mechanism of Surface-Initiated Atom Transfer Radical Polymerization From a Diazonium-Based Initiator Layer. Journal of Polymer Science. Part A, Polymer Chemistry, 50(21), 4465–4475. https://doi.org/10.1002/pola.26253

Ramsing, N. B., Hilligsøe, K. M. & Meseguer Escrivá, M. (2012). Embryo quality assessment based on blastomere cleavage and morphology. (Patent No. WO 2012163363 A1).

Larsen, A.-L. G., Francis Song, H. & Le Hur, K. (2012). d-wave superfluid with gapless edges in a cold-atom trap. Physical Review A, 85(5), 051603(R). https://doi.org/10.1103/PhysRevA.85.051603

Bahramy, M. S., King, P. D. C., de la Torre, A., Chang, J., Shi, M., Patthey, L., Balakrishnan, G., Hofmann, P., Arita, R., Nagaosa, N. & Baumberger, F. (2012). Emergent quantum confinement at topological insulator surfaces. Nature Communications, 3(1159), 1-7. https://doi.org/10.1038/ncomms2162

Arias, C. A., Matamoros, V., Loc, N. X. & Brix, H. (2012). Emerging contaminants in a restored wetland system: Occurrence and attenuation. Abstract from Proceedings from the 7th SWS 2012 European Chapter Meeting, Aarhus, Denmark.

Chua, S.-C., Xu, X. & Guo, Z. (2012). Emerging sustainable technology for epoxidation directed toward plant oil-based plasticizers. Process Biochemistry, 47(10), 1439-1451. https://doi.org/10.1016/j.procbio.2012.05.025

Ribeiro, M., Tolêdo , T., Winther, J., Brabrand, C. & Borba, P. (2012). Emergo : a tool for improving maintainability of preprocessor-based product lines. In Proceedings of the 11th annual international conference on Aspect-oriented Software Development Companion, AOSD Companion '12 (pp. 23-26 ). Association for Computing Machinery. https://doi.org/10.1145/2162110.2162128

Hossain, M. S., Liao, J., James, E. K., Sato, S., Tabata, S., Jurkiewicz, A., Madsen, L. H., Stougaard, J., Ross, L. & Szczyglowski, K. (2012). Lotus japonicus ARPC1 is required for Rhizobial Infection. Plant Physiology, 160(2), 917-928. https://doi.org/10.1104/pp.112.202572

Toft, S. & Wunderlich, J. (2012). Oecobius Amboseli Shear & Benoit 1974 (Araneae: Oecobiidae), a recently to Denmark and Europe introduced Spider Species. Beiträge zur Araneologie, 7(2012).

Gupta, V., Markmann, K., Pedersen, C. N. S., Stougaard, J. & Andersen, S. U. (2012). shortran: A pipeline for small RNA-seq data analysis. Bioinformatics, 28(20), 2698-2700. https://doi.org/10.1093/bioinformatics/bts496

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