Publications

Follow the latest publications from the Faculty of Natural Sciences.

Mashhadi, S. R. (2022). Gardaneh Salavat porphyry copper system: Is it about metal endowment or fertility of the porphyritic intrusion? Acta Geochimica, 41(3), 496-514. https://doi.org/10.1007/s11631-022-00535-0

Jensen, J. H. M. & Mølmer, K. (2022). Gaussian theory for estimating fluctuating perturbations with backaction-evading oscillator variables. Physical Review A, 106(2), Article 022613. https://doi.org/10.1103/PhysRevA.106.022613

Lystbæk, M. N., Rosenberg, P., Pfeuffer, K., Grønbæk, J. E. & Gellersen, H. (2022). Gaze-Hand Alignment: Combining Eye Gaze and Mid-Air Pointing for Interacting with Menus in Augmented Reality. Proceedings of the ACM on Human-Computer Interaction, 6(ETRA), Article 145. https://doi.org/10.1145/3530886

David, B., Magri, B., Matt, C., Nielsen, J. B. & Tschudi, D. (2022). GearBox: Optimal-size Shard Committees by Leveraging the Safety-Liveness Dichotomy. In CCS'22 - Proceedings of the 2022 ACM SIGSAC Conference on Computer and Communications Security (pp. 683-696). Association for Computing Machinery. https://doi.org/10.1145/3548606.3559375

Nyborg, J. C., Pelletier, C. & Assent, I. (2022). Generalized Classification of Satellite Image Time Series with Thermal Positional Encoding. In Proceedings - 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2022 (pp. 1391-1401). IEEE. https://doi.org/10.1109/CVPRW56347.2022.00145

Meldgaard, S. A., Köhler, J., Mortensen, H. L., Christiansen, M. P. V., Noé, F. & Hammer, B. (2022). Generating stable molecules using imitation and reinforcement learning. Machine Learning: Science and Technology, 3(1), Article 015008. https://doi.org/10.1088/2632-2153/ac3eb4

Petersen, G., Shyama Prasad Rao, R., Anderson, B., Zervas, A., Seberg, O., Rasmusson, A. G. & Max Møller, I. (2022). Genes from oxidative phosphorylation complexes II-V and two dual-function subunits of complex I are transcribed in Viscum album despite absence of the entire mitochondrial holo-complex I. Mitochondrion, 62, 1-12. https://doi.org/10.1016/j.mito.2021.10.006

Schröder, S. K., Schüler, H. M., Petersen, K. V., Tesauro, C., Knudsen, B. R., Pedersen, F. S., Krus, F., Buhl, E. M., Roeb, E., Roderfeld, M., Borojevic, R., Almeida, J. L. & Weiskirchen, R. (2022). Genetic and Molecular Characterization of the Immortalized Murine Hepatic Stellate Cell Line GRX. Cells, 11(9), Article 1504. https://doi.org/10.3390/cells11091504

Grotzinger, A. D., Mallard, T. T., Akingbuwa, W. A., Ip, H. F., Adams, M. J., Lewis, C. M., McIntosh, A. M., Grove, J., Dalsgaard, S., Lesch, K. P., Strom, N., Meier, S. M., Mattheisen, M., Børglum, A. D., Mors, O., Breen, G., iPSYCH, Tourette Syndrome and Obsessive Compulsive Disorder Working Group of the Psychiatric Genetics Consortium, Bipolar Disorder Working Group of the Psychiatric Genetics Consortium ... Nivard, M. G. (2022). Genetic architecture of 11 major psychiatric disorders at biobehavioral, functional genomic and molecular genetic levels of analysis. Nature Genetics, 54(5), 548-559. https://doi.org/10.1038/s41588-022-01057-4

Warrier, V., Zhang, X., Reed, P., Havdahl, A., Moore, T. M., Cliquet, F., Leblond, C. S., Rolland, T., Rosengren, A., Rowitch, D. H., Hurles, M. E., Geschwind, D. H., Børglum, A. D., Robinson, E. B., Grove, J., Martin, H. C., Bourgeron, T., Baron-Cohen, S., EU-AIMS LEAP ... Spectrum 10K and APEX Consortia (2022). Genetic correlates of phenotypic heterogeneity in autism. Nature Genetics, 54(9), 1293-1304. https://doi.org/10.1038/s41588-022-01072-5

Bataillon, T., Ezard, T. H. G., Kopp, M. & Masel, J. (2022). Genetics of adaptation and fitness landscapes: From toy models to testable quantitative predictions. Evolution, 76(6), 1104-1107. https://doi.org/10.1111/evo.14477

Ivy, C. M., Wearing, O. H., Natarajan, C., Schweizer, R. M., Gutiérrez-Pinto, N., Velotta, J. P., Campbell-Staton, S. C., Petersen, E. E., Fago, A., Cheviron, Z. A., Storz, J. F. & Scott, G. R. (2022). Genetic variation in haemoglobin is associated with evolved changes in breathing in high-altitude deer mice. Journal of Experimental Biology, 225(2), Article jeb243595. https://doi.org/10.1242/jeb.243595

Fields, B., Moffat, E. K., Harrison, E., Andersen, S. U., Young, J. P. W. & Friman, V.-P. (2022). Genetic variation is associated with differences in facilitative and competitive interactions in the Rhizobium leguminosarum species complex. Environmental Microbiology, 24(8), 3463-3485. https://doi.org/10.1111/1462-2920.15720

Skotte, L., Fadista, J., Bybjerg-Grauholm, J., Appadurai, V., Hildebrand, M. S., Hansen, T. F., Banasik, K., Grove, J., Albiñana, C., Geller, F., Bjurström, C. F., Vilhjálmsson, B. J., Coleman, M., Damiano, J. A., Burgess, R., Scheffer, I. E., Pedersen, O. B. V., Erikstrup, C., Westergaard, D. ... Feenstra, B. (2022). Genome-wide association study of febrile seizures implicates fever response and neuronal excitability genes. Brain : a journal of neurology, 145(2), 555–568. https://doi.org/10.1093/brain/awab260

Suppli, N. P., Andersen, K. K., Agerbo, E., Rajagopal, V. M., Appadurai, V., Coleman, J. R. I., Breen, G., Bybjerg-Grauholm, J., Bækvad-Hansen, M., Pedersen, C. B., Pedersen, M. G., Thompson, W. K., Munk-Olsen, T., Benros, M. E., Als, T. D., Grove, J., Werge, T., Børglum, A. D., Hougaard, D. M. ... Musliner, K. L. (2022). Genome-wide by Environment Interaction Study of Stressful Life Events and Hospital-Treated Depression in the iPSYCH2012 Sample. Biological Psychiatry: Global Open Science, 2(4), 400-410. https://doi.org/10.1016/j.bpsgos.2021.11.003

Liu, S., Tengstedt, A. N. B., Jacobsen, M. W., Pujolar, J. M., Jónsson, B., Lobón-Cervià, J., Bernatchez, L. & Hansen, M. M. (2022). Genome-wide methylation in the panmictic European eel (Anguilla anguilla). Molecular Ecology, 31(16), 4286-4306. https://doi.org/10.1111/mec.16586

Wood, J. M., Cesar, J., Ardakani, O. H., Rudra, A. & Sanei, H. (2022). Geochemical evidence for the internal migration of gas condensate in a major unconventional tight petroleum system. Scientific Reports, 12(1), Article 7931. https://doi.org/10.1038/s41598-022-11963-6

Davis, W. R., Collins, M., Rooney, T., Brown, E., Stein, C., Stein, S. & Moucha, R. (2022). Geochemical, petrographic, and stratigraphic analyses of the Portage Lake Volcanics of the Keweenawan CFBP: implications for the evolution of Main stage volcanism in Continental Flood Basalt Provinces. Geological Society Special Publication, 518(1), 67-100. https://doi.org/10.1144/SP518-2020-221

Kristiansen, S. M., Dalsgaard, K., Rasmussen, C. & Jakobsen, P. R. (2022). Geologi og landskab omkring den befæstede jernalderlandsby Lyngsmose. In Opdatering: Årbog for Vardemuseerne og Ringkøbing-Skjern Museum (pp. 118-129). Ringkøbing-Skjern museum. https://levendehistorie.dk/viden/aarbogen-opdatering-2

Madsen, R. B., Høyer, A. S., Andersen, L. T., Møller, I. & Hansen, T. M. (2022). Geology-driven modeling: A new probabilistic approach for incorporating uncertain geological interpretations in 3D geological modeling. Engineering Geology, 309, Article 106833. https://doi.org/10.1016/j.enggeo.2022.106833

Thorning, F., Jensen, F. & Ogilby, P. R. (2022). Geometry Dependence of Spin-Orbit Coupling in Complexes of Molecular Oxygen with Atoms, H₂, or Organic Molecules. The Journal of Physical Chemistry A, 126(6), 834-844. https://doi.org/10.1021/acs.jpca.1c09634

Jansen, J. D., Sandiford, M., Fujioka, T., Cohen, T. J., Struck, M., Anderson, S. P., Anderson, R. S., Wilcken, K. & Egholm, D. L. (2022). Geomorphic imprints of lithospheric flexure in central Australia. Earth and Planetary Science Letters, 584, Article 117456. https://doi.org/10.1016/j.epsl.2022.117456

Finn, C. A., Bedrosian, P. A., Holbrook, W. S., Auken, E., Bloss, B. R. & Crosbie, J. (2022). Geophysical imaging of the Yellowstone hydrothermal plumbing system. Nature, 603, 643-647. https://doi.org/10.1038/s41586-021-04379-1

Draganov, A., Berry, T., Jørgensen, J. R., Nellemann, K. S., Assent, I. & Mottin, D. (2022). GiDR-DUN; Gradient Dimensionality Reduction -- Differences and Unification. https://doi.org/10.48550/arXiv.2206.09689

Kjær, K. H., Bjørk, A. A., Kjeldsen, K. K., Hansen, E. S., Andresen, C. S., Siggaard-Andersen, M. L., Khan, S. A., Søndergaard, A. S., Colgan, W., Schomacker, A., Woodroffe, S., Funder, S., Rouillard, A., Jensen, J. F. & Larsen, N. K. (2022). Glacier response to the Little Ice Age during the Neoglacial cooling in Greenland. Earth-Science Reviews, 227, Article 103984. https://doi.org/10.1016/j.earscirev.2022.103984

Seeler, S., Moldovan, L.-I., Bertelsen, T., Hager, H., Iversen, L., Johansen, C., Kjems, J. & Sommer Kristensen, L. (2022). Global circRNA expression changes predate clinical and histological improvements of psoriasis patients upon secukinumab treatment. PLoS One, 17(9), Article e0275219. https://doi.org/10.1371/journal.pone.0275219

Lembrechts, J. J., van den Hoogen, J., Aalto, J., Ashcroft, M. B., De Frenne, P., Kemppinen, J., Kopecký, M., Luoto, M., Maclean, I. M. D., Crowther, T. W., Bailey, J. J., Haesen, S., Klinges, D. H., Niittynen, P., Scheffers, B. R., Van Meerbeek, K., Aartsma, P., Abdalaze, O., Abedi, M. ... Lenoir, J. (2022). Global maps of soil temperature. Global change biology, 28(9), 3110-3144. https://doi.org/10.1111/gcb.16060

Bisbo, M. K. & Hammer, B. (2022). Global optimization of atomic structure enhanced by machine learning. Physical Review B, 105(24), Article 245404. https://doi.org/10.1103/PhysRevB.105.245404

Tietje, M., Antonelli, A., Baker, W. J., Govaerts, R., Smith, S. A. & Eiserhardt, W. L. (2022). Global variation in diversification rate and species richness are unlinked in plants. Proceedings of the National Academy of Sciences (PNAS), 119(27), Article e2120662119. https://doi.org/10.1073/pnas.2120662119

Farzadfard, A., König, A., Petersen, S. V., Nielsen, J., Vasili, E., Dominguez-Meijide, A., Buell, A. K., Outeiro, T. F. & Otzen, D. E. (2022). Glycation modulates alpha-synuclein fibrillization kinetics: a sweet spot for inhibition. The Journal of Biological Chemistry, 298(5), Article 101848. https://doi.org/10.1016/j.jbc.2022.101848

Bøjesen, E. D. (2022). Going beyond ensemble average angular cross-correlation analysis. IUCrJ, 9(4), 401-402. https://doi.org/10.1107/S205225252200656X

Nielsen, C. F. (2022). GPU accelerated Monte Carlo simulation of high-intensity pulsed laser-electron interaction. Computer Physics Communications, 278, Article 108425. https://doi.org/10.1016/j.cpc.2022.108425

Jørgensen, J. R., Nellemann, K. S., Assent, I., Pathak, A. R. & Elster, A. C. (2022). GPU-FAST-PROCLUS: A Fast GPU-parallelized Approach to Projected Clustering. 196-206. Paper presented at EDBT 2022: 24th International Conference on Extending Database Technology. https://doi.org/10.48786/edbt.2022.09

Sebastian Stær Knudsen, M., Almskou Brodal, L., Peczalski, P. K., Moradan, A., Mottin, D. & Assent, I. (2022). GraB: Graph Benchmark for Heterogeneous Graph Clustering. https://openreview.net/forum?id=qsGpFRlK0a

Shi, J., Ma, S., Best, J. P., Stolpe, M., Wei, S., Zhang, P. & Markert, B. (2022). Gradient-enhanced modelling of deformation-induced anisotropic damage in metallic glasses. Journal of the Mechanics and Physics of Solids, 167, Article 105020. https://doi.org/10.1016/j.jmps.2022.105020

Asmussen, S. & Bladt, M. (2022). Gram–Charlier methods, regime-switching and stochastic volatility in exponential Lévy models. Quantitative Finance, 22(4), 675-689. https://doi.org/10.1080/14697688.2021.1998585

Røikjer, T., Hobolth, A. & Munch, K. (2022). Graph-based algorithms for phase-type distributions. Statistics and Computing, 32(6), Article 103. https://doi.org/10.1007/s11222-022-10174-3

Boix, V., Xu, W., D'Acunto, G., Stubbe, J., Gallo, T., Døvre Strømsheim, M., Zhu, S., Scardamaglia, M., Shavorskiy, A., Reuter, K., Andersen, M. & Knudsen, J. (2022). Graphene as an Adsorption Template for Studying Double Bond Activation in Catalysis. Journal of Physical Chemistry C, 126(33), 14116–14124. https://doi.org/10.1021/acs.jpcc.2c02293

Gao, H., Belova, V., La Porta, F., Cingolani, J. S., Andersen, M., Saedi, M., Konovalov, O. V., Jankowski, M., Heenen, H. H., Groot, I. M. N., Renaud, G. & Reuter, K. (2022). Graphene at Liquid Copper Catalysts: Atomic-Scale Agreement of Experimental and First-Principles Adsorption Height. Advanced Science, 9(36), Article 2204684. https://doi.org/10.1002/advs.202204684

Zheng, X., Schovsbo, N. H., Luo, Q., Wu, J., Zhong, N., Goodarzi, F. & Sanei, H. (2022). Graptolite reflectance anomaly. International Journal of Coal Geology, 261, Article 104072. https://doi.org/10.1016/j.coal.2022.104072

Jørgensen, P. & Yakimov, M. (2022). Green groupoids of 2-Calabi–Yau categories, derived Picard actions, and hyperplane arrangements. Transactions of the American Mathematical Society, 375(11), 7981-8031. https://doi.org/10.1090/tran/8770

Colgan, W., Wansing, A., Mankoff, K., Lösing, M., Hopper, J., Louden, K., Ebbing, J., Christiansen, F. G., Ingeman-Nielsen, T., Liljedahl, L. C., MacGregor, J. A., Hjartarson, Á., Bernstein, S., Karlsson, N. B., Fuchs, S., Hartikainen, J., Liakka, J., Fausto, R. S., Dahl-Jensen, D. ... Løkkegaard, A. (2022). Greenland Geothermal Heat Flow Database and Map (Version 1). Earth System Science Data, 14(5), 2209-2238. https://doi.org/10.5194/essd-14-2209-2022

Eriksen, C. B. (2022). Grew, Nehemiah. In D. Jalobeanu & C. T. Wolfe (Eds.), Encyclopedia of Early Modern Philosophy and the Sciences (pp. 785-787). Springer.

Ewert, M., Buß, L., Lauritsen, J. V., Falta, J. & Flege, J. I. (2022). Growth Mechanism of Single-Domain Monolayer MoS₂Nanosheets on Au(111) Revealed by In Situ Microscopy: Implications for Optoelectronics Applications. ACS Applied Nano Materials, 5(12), 17702-17710. https://doi.org/10.1021/acsanm.2c03584

Lueder, U., Maisch, M., Jørgensen, B. B., Druschel, G., Schmidt, C. & Kappler, A. (2022). Growth of microaerophilic Fe(II)-oxidizing bacteria using Fe(II) produced by Fe(III) photoreduction. Geobiology, 20(3), 421-434. https://doi.org/10.1111/gbi.12485

Vuorinen, K. E. M., Austrheim, G., Tremblay, J. P., Myers-Smith, I. H., Hortman, H. I., Frank, P., Barrio, I. C., Dalerum, F., Björkman, M. P., Björk, R. G., Ehrich, D., Sokolov, A., Sokolova, N., Ropars, P., Boudreau, S., Normand, S., Prendin, A. L., Schmidt, N. M., Pacheco-Solana, A. ... Speed, J. D. M. (2022). Growth rings show limited evidence for ungulates' potential to suppress shrubs across the Arctic. Environmental Research Letters, 17(3), Article 034013. https://doi.org/10.1088/1748-9326/ac5207

Wehn, U. (Ed.), Hepburn, L. (Ed.), Hsing, P.-Y., Ajates, R., Kragh, G., Mandeville, C., Somerwill, L., Kiefer, S., Haklay, M., Gold, M., Koley, M., Heinisch, B., Goldin, J. & Shanley, L. (2022). Guidance for the implementation of the UNESCO Open Science Recommendation re. "Opening science to society" (FINAL). https://doi.org/10.5281/zenodo.7472827

Wei, S. S., Yen, C. M., Marshall, I. P. G., Hamid, H. A., Kamal, S. S., Nielsen, D. S. & Ahmad, H. F. (2022). Gut microbiome and metabolome of sea cucumber (Stichopus ocellatus) as putative markers for monitoring the marine sediment pollution in Pahang, Malaysia. Marine Pollution Bulletin, 182, Article 114022. https://doi.org/10.1016/j.marpolbul.2022.114022

Pramanik, T., Sarkar, S. & Guru Row, T. N. (2022). Halogen Bonded Network Modulating the Mechanical Property Elastic and Plastic Bending in Nonconventional Molecular Solid Solutions. Crystal Growth and Design, 22(1), 48-53. https://doi.org/10.1021/acs.cgd.1c01089

Jespersen, A., Yilmaz, Z. & Vilhjálmsson, B. J. (2022). Harnessing the Power of Population Cohorts to Study the Relationship Between Endocrine-Metabolic Disorders and Depression. The American Journal of Psychiatry (Spanish Edition), 179(11), 788-790. https://doi.org/10.1176/appi.ajp.20220798

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