Publications

Follow the latest publications from the Faculty of Natural Sciences.

Asmussen, S., Christensen, B. J. & Taksar, M. I. (2013). Portfolio size as funktion of the premium: modeling and optimization. T.N. Thiele Centre, Department of Mathematics, Aarhus University. Thiele Research Reports No. 01 http://math.au.dk/publs?publid=971

Kildetoft, T. (2013). Positions of characters in finite groups and the Taketa inequality. (pp. 1311.1383). arxiv.org. http://arxiv.org/abs/1311.1383

Gunnlaugsson, H. P., Johnston, K., Masenda, H., Mantovan, R., Mølholt, T. E., Bharuth-Ram, K., Gislason, H., Langouche, G., Madsen, M. B., Naidoo, D., Ólafsson, S. & Weyer, G. (2013). Possible cage motion of interstitial Fe in α-AlO. Hyperfine Interactions, 219(1-3), 33-40. https://doi.org/10.1007/s10751-012-0697-1

Zhai, X. (2013). Potential of Root Exudates from Wetland Plants and Their Potential Role for Denitrification and Allelopathic Interactions. Aarhus University.

Bjerre, D., Madsen, L. B., Mark, T., Cirera, S., Larsen, K., Jørgensen, C. B. & Fredholm, M. (2013). Potential Role of the Porcine Superoxide Dismutase 1 (SOD1) Gene in Pig Reproduction. Animal Biotechnology, 24(1), 1-9. https://doi.org/10.1080/10495398.2012.723083

Glombitza, C., Inagaki, F., Lever, M. & Jørgensen, B. B. (2013). Potential sulfate reduction in deeply buried coalbeds 2 km below the seafloor off the Shimokita Peninsula (Japan). Abstract from AGU Fall Meeting, San Francisco, United States.

Damgård, I. B., Keller, M., Larraia , E., Pastro, V., Scholl, P. & Smart, N. P. (2013). Practical Covertly Secure MPC for Dishonest Majority – or: Breaking the SPDZ Limits. In J. Crampton , S. Jajodia & K. Mayes (Eds.), Computer Security – ESORICS 2013: 18th European Symposium on Research in Computer Security, Egham, UK, September 9-13, 2013. Proceedings (pp. 1-18 ). Springer VS. https://doi.org/10.1007/978-3-642-40203-6_1

Jiang, H., Bak, J. R., Delgado, J. L. & Jørgensen, K. A. (2013). Practical metal- and additive-free methods for radical-mediated reduction and cyclization reactions. Green Chemistry, 15(12), 3355-3359. https://doi.org/10.1039/c3gc41520a

Madsen, M., Livshits, B. & Fanning, M. (2013). Practical static analysis of JavaScript applications in the presence of frameworks and libraries. In B. Meyer, L. Baresi & M. Mezini (Eds.), Proceedings of the 2013 9th Joint Meeting on Foundations of Software Engineering , ESEC/FSE 2013 (pp. 499-509). Association for Computing Machinery. https://doi.org/10.1145/2491411.2491417

Pierce, J., Strengers, Y., Sengers, P. & Bødker, S. (Eds.) (2013). Practice-oriented approaches to Sustainable HCI: A Special Issue of ACM Transactions on Computer-Human Interaction (ACM TOCHI). ACM Transactions on Computer-Human Interaction, 20(4). http://dl.acm.org/citation.cfm?id=2509404&picked=prox&cfid=249995314&cftoken=45766466

Hautsch, N. & Podolskij, M. (2013). Pre-averaging based estimation of quadratic variation in the presence of noise and jumps: theory, implementation, and empirical evidence. Journal of Business and Economic Statistics, 31(2), 165-183.

Lloyd, K., Schreiber, L., Petersen, D. G., Kjeldsen, K. U., Lever, M. A., Steen, A. D., Stepanauskas, R., Richter, M., Kleindienst, S., Lenk, S., Schramm, A. & Jorgensen, B. B. (2013). Predominant archaea in marine sediments degrade detrital proteins. Nature, 496(7444), 215-218. https://doi.org/10.1038/nature12033

Kjær-Sørensen, K., Engholm, D. H., Kamei, H., Mørch, M. G. M., Kristensen, A. O., Zhou, J., Conover, C. A., Duan, C. & Oxvig, C. (2013). Pregnancy-associated plasma protein-A (PAPP-A) modulates early developmental rate in zebrafish independent of its proteolytic activity. Journal of Biological Chemistry, 288, 9982-9992. https://doi.org/10.1074/jbc.M112.426304

Lin, L., Zhang, H., Cui, H., Xu, M., Cao, S., Zheng, G. & Dong, M. (2013). Preparation and antibacterial activities of hollow silica-Ag spheres. Colloids and Surfaces B: Biointerfaces, 101, 97-100. https://doi.org/10.1016/j.colsurfb.2012.06.001

Rodenas, P. A., Sánchez-Fernández, D., Picazo, F., Millán, A., Lobo, J. M. & Ribera, I. (2013). Preserving the evolutionary history of freshwater biota in Iberian National Parks. Biological Conservation, 162, 116-126. https://doi.org/10.1016/j.biocon.2013.04.001

Kumar, R. S., Svane, A., Vaitheeswaran, G., Zhang, Y., Kanchana, V., Hofmann, M., Campbell, S. J., Xiao, Y., Chow, P., Chen, C., Zhao, Y. & Cornelius, A. L. (2013). Pressure-Induced Valence and Structural Changes in YbMn₂Ge₂ -Inelastic X-ray Spectroscopy and Theoretical Investigations. Inorganic Chemistry, 52(2), 832-839. https://doi.org/10.1021/ic3019698

Scheins, S., Overgaard, J., Timco, G. A., Stash, A., Chen, Y.-S., Larsen, F. K., Christensen, M., Jørgensen, M. R. V., Madsen, S. R., Schmøkel, M. S. & Iversen, B. B. (2013). Pressure versus Temperature Effects on Intramolecular Electron Transfer in Mixed-Valence Complexes. Chemistry: A European Journal, 19(1), 195-205. https://doi.org/10.1002/chem.201201669

Hansen, J. P. (2013). Primtalsmysterier: Fra Euklid til NemID. In H. A. Salomonsen (Ed.), Matematiske mysterier: Historien, forklaringer og løsninger (pp. 55-82). Aarhus Universitetsforlag.

Erkin, Z., Veugen, T., Toft, T. & Lagendijk, R. L. (2013). Privacy-preserving distributed clustering. Eurasip Journal on Information Security, 1, Article 4. https://doi.org/10.1186/1687-417X-2013-4

Kotsubei, A., Gorgel, M., Morth, J. P., Nissen, P. & Andersen, J. L. (2013). Probing determinants of cyclopiazonic acid sensitivity of bacterial Ca(2+) -ATPases. FEBS journal, 280(21), 5441–5449. https://doi.org/10.1111/febs.12310

Niedzialek, D., Lemaur, V., Dudenko, D., Shu, J., Hansen, M. R., Andreasen, J. W., Pisula, W., Müllen, K., Cornil, J. & Beljonne, D. (2013). Probing the Relation Between Charge Transport and Supramolecular Organization Down to the Angström Resolution in a Benzothiadiazolecyclopentadithiophene Copolymer. Advanced Materials, 25(13), 1939-1947. https://doi.org/10.1002/adma.201201058

Kjeldsen, T. H. & Sørensen, H. K. (2013). Problem oriented project work in history of mathematics: Report from a PhD summer course. BSHM Bulletin: Journal of the British Society for the History of Mathematics, 28(1), 59-63. https://doi.org/10.1080/17498430.2013.729922

Ernst, E. (Ed.) (2013). Proceedings of the 12th workshop on Foundations of aspect-oriented languages. Association for Computing Machinery.

Fritsch, J., Dalsgaard, P., Hansen, N. B. & Petersen, M. G. (Eds.) (2013). Proceedings of the 2013 Student Interaction Design Research conference (SIDeR 2013).

Jensen, C. S., Jermaine, C. & Zhou, X. (Eds.) (2013). Proceedings of the 29th IEEE International Conference on Data Engineering, (ICDE). IEEE. http://ieeexplore.ieee.org.ez.statsbiblioteket.dk:2048/xpl/mostRecentIssue.jsp?punumber=6530811

Assent, I., Domeniconi, C., Gullo, F., Tagarelli, A. & Zimek, A. (Eds.) (2013). Proceedings of the 4th MultiClust Workshop on Multiple Clusterings, Multi-view Data, and Multi-source Knowledge-driven Clustering. Association for Computing Machinery. http://dl.acm.org.ez.statsbiblioteket.dk:2048/citation.cfm?id=2501006&coll=DL&dl=ACM

Mackay, W. E., Brewster, S. & Bødker, S. (Eds.) (2013). Proceedings of the SIGCHI Conference on Human Factors in Computing Systems: ACM SIGCHI Conference, Paris, France — April 27 - May 02, 2013. Association for Computing Machinery. http://dl.acm.org/citation.cfm?id=2470654

Gulliksen, J., Dasari, D. & Mølmer, K. (2013). Process characterization with Monte Carlo wave functions. Physical Review A, 88(5), Article 052129. https://doi.org/10.1103/PhysRevA.88.052129

J.E., P., Auken, E., Schamper, C. N. C., Christiansen, A. V., Kalscheuer, T. & Green, A. G. (2013). Processing and inversion of commercial helicopter time-domain electromagnetic data for environmental assessments and geologic and hydrologic mapping. Geophysics, 78, E149-E159. https://doi.org/10.1190/GEO2012-0452.1

Pedersen, P. L., Gajdacz, M., Winter, N., Hilliard, A., Sherson, J. & Arlt, J. (2013). Production and manipulation of wave packets from ultracold atoms in an optical lattice. Physical Review A, 88(2), Article 023620. https://doi.org/10.1103/PhysRevA.88.023620

Virtanen, R., Grytnes, J.-A., Lenoir, J., Luoto, M., Oksanen, J., Oksanen, L. & Svenning, J.-C. (2013). Productivity-diversity patterns in arctic tundra vegetation. Ecography, 36(3), 331-341. https://doi.org/10.1111/j.1600-0587.2012.07903.x

Kragh, H. (2013). Professor Röntgens usynlige stråler. In 50 Opdagelser: Højdepunkter i Naturvidenskaben (pp. 163-170). Aarhus Universitetsforlag.

Saleh, G., Soave, R., Lo Presti, L. & Destro, R. (2013). Progress in the understanding of the key pharmacophoric features of the antimalarial drug dihydroartemisinin: An experimental and theoretical charge density study. Chemistry: A European Journal, 19(10), 3490-3503. https://doi.org/10.1002/chem.201202486

Cohen, S. I. A., Linse, S., Luheshi, L. M., Hellstrand, E., White, D. A., Rajah, L., Otzen, D., Vendruscolo, M., Dobson, C. M. & Knowles, T. P. J. (2013). Proliferation of amyloid-β42 aggregates occurs through a secondary nucleation mechanism. Proceedings of the National Academy of Sciences (PNAS), 110(24), 9758-9763. https://doi.org/10.1073/pnas.1218402110

Puech, M. (2013). Proofs, Upside Down. In Programming Languages and Systems: 11th Asian Symposium, APLAS 2013, Melbourne, VIC, Australia, December 9-11, 2013. Proceedings (pp. 365-380 ). Springer VS. https://doi.org/10.1007/978-3-319-03542-0_26

Benomar, O., Bedding, T. R., Mosser, B., Stello, D., Belkacem, K., Garcia, R. A., White, T. R., Kuehn, C. A., Deheuvels, S. & Christensen-Dalsgaard, J. (2013). Properties of Oscillation Modes in Subgiant Stars Observed by Kepler. Astrophysical Journal, 767(2), 158. https://doi.org/10.1088/0004-637X/767/2/158

Afshani, P., Matulef, K. & Wilkinson, B. T. (2013). Property Testing on Linked Lists. Electronic Colloquium on Computational Complexity, TR13-187. http://www.informatik.uni-trier.de/~ley/db/journals/eccc/eccc20.html

Horan, K. A., Hansen, K., Jakobsen, M. R., Holm, C. K., Søby, S., Unterholzner, L., Thompson, M., West, J. A., Iversen, M. B., Rasmussen, S. B., Ellermann-Eriksen, S., Kurt-Jones, E., Landolfo, S., Damania, B., Melchjorsen, J., Bowie, A. G., Fitzgerald, K. A. & Paludan, S. R. (2013). Proteasomal Degradation of Herpes Simplex Virus Capsids in Macrophages Releases DNA to the Cytosol for Recognition by DNA Sensors. Journal of Immunology, 190(5), 2311-2329. https://doi.org/10.4049/jimmunol.1202749

Petersen, K. K., Hørlyck, A., Østergaard, K. H., Andresen, J., Brøgger, T. H., Jensen, N. S., Telinius, N., Laher, I., Bertelsen, M. F., Grøndahl, C., Smerup, M. H., Secher, N. H., Brøndum, E., Hasenkam, J. M., Wang, T., Baandrup, U. & Aalkjaer, C. (2013). Protection against high intravascular pressure in giraffe legs. American Journal of Physiology: Regulatory, Integrative and Comparative Physiology, 305(9), R1021-30. https://doi.org/10.1152/ajpregu.00025.2013

Gonzalez, B. B., Dagnæs-Hansen, F., Fenton, R. A., Gao, S., Hein, S., Dong, M., Kjems, J. & Howard, K. A. (2013). Protection and systemic translocation of siRNA following oral administration of chitosan/siRNA nanoparticles. Molecular Therapy - Nucleic Acids, 2(1), 1-8. Article e76. https://doi.org/10.1038/mtna.2013.2

Kristensen, S., Pedersen, G. A., Nejsum, L. N. & Sutherland, D. S. (2013). Protein adsorption at nanopatterned surfaces studied by QCM-D and SPR. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 117(36), 10376-10383. https://doi.org/10.1021/jp4038528

Martin, S. F., Falkenberg, H., Dyrlund, T. F., Khoudoli, G. A., Mageean, C. J. & Linding, R. (2013). PROTEINCHALLENGE: Crowd sourcing in proteomics analysis and software development. Journal of Proteomics, 88, 41-46. https://doi.org/10.1016/j.jprot.2012.11.014

Bundgaard, L., Bendixen, E., Sørensen, M. A., Petersen, L. J. & Jacobsen, S. (2013). Protein composition and inflammatory markers in equine wound fluid.

Bager, R., Johansen, J. S., Jensen, J. K., Stensballe, A., Jendroszek, A., Nielsen, L. B., Sørensen, H. P. & Andreasen, P. A. (2013). Protein Conformational Change Delayed by Steric Hindrance from an N-Linked Glycan. Journal of Molecular Biology, 425(16), 2867–2877. https://doi.org/10.1016/j.jmb.2013.05.007

Kehan, X., Dedic, E., Cob-Cantal, P., Dienemann, C., Bøggild, A., Winther, K. S., Gerdes, K. & Brodersen, D. E. (2013). Protein expression, crystallization and preliminary X-ray crystallographic analysis of the isolated Shigella flexneri VapC toxin. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications Online, 69(Pt 7), 762-765. https://doi.org/10.1107/S1744309113014012

Brinkmann, C. R., Thiel, S. & Otzen, D. (2013). Protein:fatty acid complexes: Biochemistry, biophysics and function. FEBS journal, 280(8), 1733–1749. https://doi.org/10.1111/febs.12204

Guerreiro, J. R., Sutherland, D. S., De Freitas, V. & Sales, M. G. (2013). Protein-polyphenol interaction on silica beads for astringency tests based on eye, photography or reflectance detection modes. Analytical Methods, 5(11), 2694-2703. https://doi.org/10.1039/C3AY26478E

Wood, K., Gallat, F.-X., Otten, R., van Heel, A. J., Lethier, M., van Eijck, L., Moulin, M., Haertlein, M., Weik, M. & Mulder, F. A. A. (2013). Protein Surface and Core Dynamics Show Concerted Hydration-Dependent Activation. Angewandte Chemie International Edition, 52(2), 665-668. https://doi.org/10.1002/anie.201205898

Vermeulen, C. J., Pedersen, K. S., Beck, H. C., Petersen, J., Gagalova, K. K. & Loeschcke, V. (2013). Proteomic Characterization of Inbreeding-Related Cold Sensitivity in Drosophila melanogaster. PLoS One, 8(5). https://doi.org/10.1371/journal.pone.0062680

Colinet, H., Overgaard, J., Com, E. & Sørensen, J. G. (2013). Proteomic profiling of thermal acclimation in Drosophila melanogaster. Insect Biochemistry and Molecular Biology, 43, 352-365.

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