Publications

Follow the latest publications from the Faculty of Natural Sciences.

Knudsen, K. L., Eiríksson, J. & Símonarson, L. A. (2021). Foraminifera in the Pliocene Barmur Group on Tjörnes, North Iceland. In J. Eiríksson & L. A. Símonarson (Eds.), Pacific – Atlantic Mollusc Migration: Pliocene Inter-Ocean Gateway Archives on Tjörnes, North Iceland (pp. 443-524). Springer.

Pastorello, A., Valerin, G., Fraser, M., Elias-Rosa, N., Valenti, S., Reguitti, A., Mazzali, P. A., Amaro, R. C., Andrews, J. E., Dong, Y., Jencson, J., Lundquist, M., Reichart, D. E., Sand, D. J., Wyatt, S., Smartt, S. J., Smith, K. W., Srivastav, S., Cai, Y. Z. ... Wainscoat, R. (2021). Forbidden hugs in pandemic times: II. the luminous red nova variety: AT 2020hat and AT 2020kog. Astronomy and Astrophysics, 647, Article A93. https://doi.org/10.1051/0004-6361/202039953

Pastorello, A., Fraser, M., Valerin, G., Reguitti, A., Itagaki, K., Ochner, P., Williams, S. C., Jones, D., Munday, J., Smartt, S. J., Smith, K. W., Srivastav, S., Elias-Rosa, N., Kankare, E., Karamehmetoglu, E., Lundqvist, P., Mazzali, P. A., Munari, U., Stritzinger, M. D. ... Rest, A. (2021). Forbidden hugs in pandemic times: I. Luminous red nova AT 2019zhd, a new merger in M 31. Astronomy and Astrophysics, 646, Article A119. https://doi.org/10.1051/0004-6361/202039952

Song, H., Eller, F., Guo, X., Jespersen, E., Ye, S. & Guo, W. (2021). Foreseeing reed invasions: European genotypes of common reed (Phragmites australis) grow equally well in China as in their native environment and show similar performance as native Chinese genotypes. Aquatic Botany, 172, Article 103398. https://doi.org/10.1016/j.aquabot.2021.103398

Thomsen, S. E. & Spitters, B. (2021). Formalizing Nakamoto-Style Proof of Stake. In Proceedings - 2021 IEEE 34th Computer Security Foundations Symposium, CSF 2021 IEEE. https://doi.org/10.1109/CSF51468.2021.00042

Kulik, T., Boudjadar, J. & Aranha, D. F. (2021). Formally Verified Credentials Management for Industrial Control Systems. In Proceedings - 2021 IEEE/ACM 9th International Conference on Formal Methods in Software Engineering, FormaliSE 2021: 9th IEEE/ACM International Conference on Formal Methods in Software Engineering (pp. 75-85). IEEE. https://doi.org/10.1109/FormaliSE52586.2021.00014

Head, M. J., Pillans, B., Zalasiewicz, J. A. & the ICS Subcommission on Quaternary Stratigraphy (2021). Formal ratification of subseries for the Pleistocene Series of the Quaternary System. Episodes, 44(3), 241-247. https://doi.org/10.18814/epiiugs/2020/020084

Sidorenco, N., Oechsner, S. & Spitters, B. (2021). Formal security analysis of MPC-in-the-head zero-knowledge protocols. In Proceedings - 2021 IEEE 34th Computer Security Foundations Symposium, CSF 2021 (pp. 607-620). IEEE. https://doi.org/10.1109/CSF51468.2021.00050

Chen, H. L., Tauris, T. M., Han, Z. & Chen, X. (2021). Formation of millisecond pulsars with helium white dwarfs, ultra-compact X-ray binaries, and gravitational wave sources. Monthly Notices of the Royal Astronomical Society, 503(3), 3540-3551. https://doi.org/10.1093/mnras/stab670

Simonsen, F. D. S. (2021). Formation of water ice clusters on clean and functionalised graphite.

Simonsen, F. D. S., Kyrkjebø, S., Balog, R., Hornekær, L., Srivastava, P. & Morgenstern, K. (2021). Formation of water ice clusters on graphite.

Nielsen, K. H. (2021). Forskning, formidling og følelser: Galathea 3-ekspeditionen 2006-2007. In P. A. Toft & K. H. Nielsen (Eds.), Dansk ekspeditionshistorie 1945-2020, bd. 3: Kold krig, afkolonisering og nye horisonter (pp. 372-403). Gad.

Nielsen, K. H. (2021). Forskning som modmagt. Weekendavisen, Sektion 4 (Ideer), 11-11.

Heymann, M. (2021). Forståelser af klima: epistemologi og politik. In M. Thorup & J. Bek-Thomsen (Eds.), Klimaets Idéhistorie (pp. 145-160). Baggrund.

Fehre, K., Novikovskiy, N. M., Grundmann, S., Kastirke, G., Eckart, S., Trinter, F., Rist, J., Hartung, A., Trabert, D., Janke, C., Nalin, G., Pitzer, M., Zeller, S., Wiegandt, F., Weller, M., Kircher, M., Hofmann, M., Schmidt, L. P. H., Knie, A. ... Demekhin, P. V. (2021). Fourfold Differential Photoelectron Circular Dichroism. Physical Review Letters, 127(10), Article 103201. https://doi.org/10.1103/PhysRevLett.127.103201

Tsitsulin, A., Munkhoeva, M., Mottin, D., Karras, P., Oseledets, I. & Mueller, E. (2021). FREDE: Anytime Graph Embeddings. Proceedings of the VLDB Endowment, 14(6), 1102-1110. https://doi.org/10.14778/3447689.3447713

Carter, J. (2021). “Free rides” in Mathematics. Synthese, 199(3-4), 10475-10498. https://doi.org/10.1007/s11229-021-03255-9

Zhu, W., Hutchison, J. A., Dong, M. & Li, M. (2021). Frequency Shift Surface-Enhanced Raman Spectroscopy Sensing: An Ultrasensitive Multiplex Assay for Biomarkers in Human Health. ACS Sensors, 6(5), 1704-1716. https://doi.org/10.1021/acssensors.1c00393

Nielsen, M. B., Vogensen, T. K., Thyrring, J., Sørensen, J. G. & Sejr, M. K. (2021). Freshening increases the susceptibility to heat stress in intertidal mussels (Mytilus edulis) from the Arctic. Journal of Animal Ecology, 90(6), 1515-1524. https://doi.org/10.1111/1365-2656.13472

Lerner, E., Barth, A., Hendrix, J., Ambrose, B., Birkedal, V., Blanchard, S. C., Börner, R., Chung, H. S., Cordes, T., Craggs, T. D., Deniz, A. A., Diao, J., Fei, J., Gonzalez, R. L., Gopich, I. V., Ha, T., Hanke, C. A., Haran, G., Hatzakis, N. S. ... Weiss, S. (2021). FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices. eLife, 10, Article 60416. https://doi.org/10.7554/eLife.60416

Çanakçı, İ. & Jørgensen, P. (2021). Friezes, weak friezes, and T-paths. Advances in Applied Mathematics, 131, Article 102253. https://doi.org/10.1016/j.aam.2021.102253

Chacón-Labella, J., Boakye, M., Enquist, B. J., Farfan-Rios, W., Gya, R., Halbritter, A. H., Middleton, S. L., Von Oppen, J., Pastor Ploskonka, S., Strydom, T., Vandvik, V. & Geange, S. R. (2021). From a crisis to an opportunity: Eight insights for doing science in the COVID‐19 era and beyond. Ecology and Evolution, 11(8), 3588-3596. https://doi.org/10.1002/ece3.7026

Christensen, S. B., Simonsen, H. T., Engedal, N., Nissen, P., Møller, J. V., Denmeade, S. R. & Isaacs, J. T. (2021). From Plant to Patient: Thapsigargin, a Tool for Understanding Natural Product Chemistry, Total Syntheses, Biosynthesis, Taxonomy, ATPases, Cell Death, and Drug Development. In A. D. Kinghorn, H. Falk, S. Gibbons, Y. Asakawa, J. K. Liu & V. M. Dirsch (Eds.), Progress in the Chemistry of Organic Natural Products (Vol. 115, pp. 59-114). Springer. https://doi.org/10.1007/978-3-030-64853-4_2

Zarei, M., Rahimi, K., Hassanzadeh, K., Abdi, M., Hosseini, V., Fathi, A. & Kakaei, K. (2021). From the environment to the cells: An overview on pivotal factors which affect spreading and infection in COVID-19 pandemic. Environmental Research, 201, Article 111555. https://doi.org/10.1016/j.envres.2021.111555

Wang, H., Xu, C., Liu, Y., Jeppesen, E., Svenning, J. C., Wu, J., Zhang, W., Zhou, T., Wang, P., Nangombe, S., Ma, J., Duan, H., Fang, J. & Xie, P. (2021). From unusual suspect to serial killer: Cyanotoxins boosted by climate change may jeopardize megafauna. The Innovation, 2(2), Article 100092. https://doi.org/10.1016/j.xinn.2021.100092

Rodriguez-Dominguez, M. A. (2021). From wastewater to industry, the potential of Constructed Wetland biomass to produce high value bio-resources. Abstract from Danish Water Forum, Denmark.

Mroginski, M. A., Adam, S., Amoyal, G. S., Barnoy, A., Bondar, A. N., Borin, V. A., Church, J. R., Domratcheva, T., Ensing, B., Fanelli, F., Ferré, N., Filiba, O., Pedraza-González, L., González, R., González-Espinoza, C. E., Kar, R. K., Kemmler, L., Kim, S. S., Kongsted, J. ... Schapiro, I. (2021). Frontiers in Multiscale Modeling of Photoreceptor Proteins. Photochemistry and Photobiology, 97(2), 243-269. https://doi.org/10.1111/php.13372

Jacobs, K., Timany, A. & Devriese, D. (2021). Fully abstract from static to gradual. Proceedings of the ACM on Programming Languages , 5(POPL), Article 7. https://doi.org/10.1145/3434288

Reginald, S. S., Etzerodt, M., Fapyane, D. & Chang, I. S. (2021). Functional Expression of a Mo-Cu-Dependent Carbon Monoxide Dehydrogenase (CODH) and Its Use as a Dissolved CO Bio-microsensor. ACS Sensors, 6(7), 2772–2782. https://doi.org/10.1021/acssensors.1c01243

Scoma, A. (2021). Functional groups in microbial ecology: updated definitions of piezophiles as suggested by hydrostatic pressure dependence on temperature. ISME Journal, 15(7), 1871-1878. https://doi.org/10.1038/s41396-021-00930-0

Thomsen, H. S. (2021). Functional Impact of Circular RNA-Protein Interactions. [PhD dissertation, Aarhus University]. Aarhus Universitet.

Agergaard, A. H. (2021). Functional Polymers for Molecular Adhesives and Degradable Materials. [PhD dissertation, Aarhus University]. Aarhus Universitet.

Lundgren, E., Schowanek, S. D., Rowan, J., Middleton, O., Pedersen, R. Ø., Wallach, A. D., Ramp, D., Davis, M., Sandom, C. J. & Svenning, J.-C. (2021). Functional traits of the world’s late Quaternary large-bodied avian and mammalian herbivores. Scientific Data, 8(1), Article 17. https://doi.org/10.1038/s41597-020-00788-5

Sharma, S., Hayden, M. R., Bland-Hawthorn, J., Stello, D., Buder, S., Zinn, J. C., Kallinger, T., Asplund, M., De Silva, G. M., D'Orazi, V., Freeman, K., Kos, J., Lewis, G. F., Lin, J., Lind, K., Martell, S., Simpson, J. D., Wittenmyer, R. A., Zucker, D. B. ... Wyse, R. F. G. (2021). Fundamental relations for the velocity dispersion of stars in the Milky Way. Monthly Notices of the Royal Astronomical Society, 506(2), 1761-1776. https://doi.org/10.1093/mnras/stab1086

Porras, M. F., Agudelo-Cantero, G. A., Santiago-Martínez, M. G., Navas, C. A., Loeschcke, V., Sørensen, J. G. & Rajotte, E. G. (2021). Fungal infections lead to shifts in thermal tolerance and voluntary exposure to extreme temperatures in both prey and predator insects. Scientific Reports, 11, Article 21710. https://doi.org/10.1038/s41598-021-00248-z

Autzen, M., Murray, A. S., Jain, M. & Buylaert, J. P. (2021). Further investigations into the effect of charge imbalance on luminescence production. Journal of Luminescence, 238, Article 118223. https://doi.org/10.1016/j.jlumin.2021.118223

Larsen, K. G., Starup, J. L. & Steensgaard, J. (2021). Further Unifying the Landscape of Cell Probe Lower Bounds. 224-231. Paper presented at Happening virtually , -. https://cs.au.dk/~larsen/papers/FurtherUnifying.pdf

Martín-Encinas, E., Rubiales, G., Knudsen, B. R., Palacios, F. & Alonso, C. (2021). Fused chromeno and quinolino[1,8]naphthyridines: Synthesis and biological evaluation as topoisomerase I inhibitors and antiproliferative agents. Bioorganic and Medicinal Chemistry, 40, Article 116177. https://doi.org/10.1016/j.bmc.2021.116177

Nielsen, K. H. (2021). Fusk, sjusk og direkte løgn: Den videnskabelige verden står over for store udfordringer med uredelighed og tvivlsom forskningspraksis. Det er på tide, vi erkender problemet. Weekendavisen, Sektion 4 (Ideer), 7.

Nissen, P. E., Silva-Cabrera, J. S. & Schuster, W. J. (2021). G 112-43/44: A metal-poor binary star with a unique chemical composition and Helmi stream kinematics. Astronomy and Astrophysics, 651(July), Article A57. https://doi.org/10.1051/0004-6361/202140826

Hall-Andersen, M. N. & Schwartzbach, N. I. (2021). Game Theory on the Blockchain: A Model for Games with Smart Contracts. In I. Caragiannis & K. A. Hansen (Eds.), Algorithmic Game Theory - 14th International Symposium, SAGT 2021, Proceedings: 14th International Symposium, SAGT 2021, Aarhus, Denmark, September 21–24, 2021Proceedings (pp. 156-170). Springer. https://doi.org/10.1007/978-3-030-85947-3_11

Karoff, C. (2021). Gasgiganterne viser sig frem i august. Kristeligt Dagblad.

Toker, Y. & Andersen, L. H. (2021). Gas-phase studies of the retinal protonated Schiff base chromophore. European Physical Journal D, 75(1), Article 7. https://doi.org/10.1140/epjd/s10053-020-00024-0

Ramirez Gomez, A., Clarke, C., Sidenmark, L. & Gellersen, H. (2021). Gaze+Hold: Eyes-Only Direct Manipulation with Continuous Gaze Modulated by Closure of One Eye. In Proceedings - ETRA 2021: ACM Symposium on Eye Tracking Research and Applications, Full Papers Proceedings (pp. 1-12). Article 10 Association for Computing Machinery. https://doi.org/10.1145/3448017.3457381

Wang, X., Hao, D. & Kadarmideen, H. N. (2021). GeneDMRs: An R Package for Gene-Based Differentially Methylated Regions Analysis. Journal of Computational Biology, 28(3), 304-316. https://doi.org/10.1089/cmb.2020.0081

Kjølbye, L. R., De Maria, L., Wassenaar, T. A., Abdizadeh, H., Marrink, S. J., Ferkinghoff-Borg, J. & Schiøtt, B. (2021). General Protocol for Constructing Molecular Models of Nanodiscs. Journal of Chemical Information and Modeling, 61(6), 2869-2883. https://doi.org/10.1021/acs.jcim.1c00157

Barfknecht, R. E., Foerster, A., Zinner, N. T. & Volosniev, A. G. (2021). Generation of spin currents by a temperature gradient in a two-terminal device. Communications Physics, 4, Article 252. https://doi.org/10.1038/s42005-021-00753-7

Zhang, J., Wu, S., Zhang, Y. & Zhou, Z. (2021). Generation of two-axis countertwisting squeezed spin states via Uhrig dynamical decoupling. Science China Information Sciences, 64(2), Article 122502. https://doi.org/10.1007/s11432-020-3075-2

Beaudouin-Lafon, M., Bødker, S. & Mackay, W. E. (2021). Generative Theories of Interaction. ACM Transactions on Computer-Human Interaction, 28(6), Article 45. https://doi.org/10.1145/3468505

Hede, E., Christiansen, C. B., Würtz Heegaard, C., Moos, T. & Burkhart, A. (2021). Gene therapy to the blood-brain barrier with resulting protein secretion as a strategy for treatment of Niemann Picks type C2 disease. Journal of Neurochemistry, 156 (3), 290–308. https://doi.org/10.1111/jnc.14982

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