Publications

Follow the latest publications from the Faculty of Natural Sciences.

Wassmann, P., Jørgensen, B. B., Reigstad, M. & Slagstad, D. (2009). Sedimentation and degradation of biogenic matter. In E. Sakshaug, G. Johnsen & K. Kovacs (Eds.), Ecosystem Barents Sea (pp. 323-338). TAPIR Akademisk Forlag.

Rezazadegan, R. (2009). Seidel-Smith cohomology for tangles. Selecta Mathematica, 15(3), 487--518. https://doi.org/10.1007/s00029-009-0002-6

Christiansen, C., Leipe, T., Witt, G., Christoffersen, P. L. & Lund-Hansen, L. C. (2009). Selected elements, PCBs, and PAHs in sediments of the North Sea - Baltic Sea transition zone: Sources and transport as derived from the distribution pattern. Geografisk Tidsskrift - Danish Journal of Geography, 109(1), 81-94.

Lee, S., Molina, L. M., López, M. J., Alonso, J. A., Hammer, B., Lee, B., Seifert, S., Winans, R. E., Elam, J. W., Pellin, M. J. & Vajda, S. (2009). Selective Propene Epoxidation on Immobilized Au_6-10 Clusters: The Effect of Hydrogen and Water on Activity and Selectivity. Angewandte Chemie International Edition, 48(8), 1467 - 1471. https://doi.org/10.1002/anie.200804154

Hylleberg, J. & Gallucci, V. (2009). Selectivity in feeding by the deposit-feeding bivalve Macoma nasuta. Marine Biology, 32, 167-178.

Uyar, T., Cianga, I., Cianga, L., Besenbacher, F. & Yagci, Y. (2009). Self-aligned and bundled electrospun fibers prepared from blends of polystyrene (PS) and poly (methyl methacrylate) (PMMA) with a hairy-rod polyphenylene copolymer. Materials Letters, 63, 1638-1641. https://doi.org/10.1016/j.matlet.2009.04.039

Andersen, E. S., Dong, M., Nielsen, M. M., Jahn, K., Subramani, R., Mamdouh, W., Golas, M. M., Sander, B., Stark, H., Oliveira, C. L. P., Pedersen, J. S., Birkedal, V., Besenbacher, F., Gothelf, K. V. & Kjems, J. (2009). Self-assembly of a nanoscale DNA box with a controllable lid. Nature, 459(7243), 73-6. https://doi.org/10.1038/nature07971

Mamdouh, W., Kelly, R. E. A., Dong, M., Jacobsen, M. F., Ferapontova, E., Kantorovich, L., Gothelf, K. V. & Besenbacher, F. (2009). Self-assembly of artificial nucleobase 1H-benzoimidazole-4,7-dione at the liquid/solid interface. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 113(25), 8675-8681. https://doi.org/10.1021/jp9029419

Telelis, O., Gourvès, L. & Monnot, J. (2009). Selfish Scheduling with Setup Times. Lecture Notes in Computer Science, 292-303. https://doi.org/10.1007/978-3-642-10841-9_27

Kristensen, M. (2009). Sensing applications of silicon-on-insulator photonic crystal waveguides. Abstract from OFS-20 (Optical Fibre Sensor) Conference, Edinburgh, United Kingdom.

Ferapontova, E., Olsen, E. M., Olesen, A. B. & Gothelf, K. V. (2009). Sensing with Aptamer Electrodes in Serum. Abstract from The 60th Annual Meeting of the International Society of Electrochemistry, Beijing, China.

Goswami, M., Madhu, P. K., Dittmer, J., Nielsen, N. C. & Ganapathy, S. (2009). Sensitivity enhancement of ²⁹Si double-quantum dipolar recoupling spectroscopy by Carr-Purcell-Meiboom-Gill acquisition method. Chemical Physics Letters, 478, 287-291.

Quistgaard, E. M. H. & Thirup, S. S. (2009). Sequence and structural analysis of the Asp-box motif and Asp-box beta-propellers; a widespread propeller-type characteristic of the Vps10 domain family and several glycoside hydrolase families. BMC Structural Biology, 9. https://doi.org/10.1186/1472-6807-9-46

Larsen, K. & Madsen, L. B. (2009). Sequence conservation between porcine and human LRRK2. Molecular Biology Reports, 36(2), 237-243. https://doi.org/10.1007/s11033-007-9172-5

Abildgaard, L., Engberg, R. M., Pedersen, K., Schramm, A. & Hojberg, O. (2009). Sequence variation in the alpha-toxin encoding plc gene of Clostridium perfringens strains isolated from diseased and healthy chickens. Veterinary Microbiology, 136(3-4), 293-299. https://doi.org/10.1016/j.vetmic.2008.11.001

Goossens, G. H., Petersen, L., Blaak, E. E., Hul, G., Arner, P., Astrup, A., Froguel, P., Patel, K., Pedersen, O., Polak, J., Oppert, J.-M., Martinez, J. A., Sørensen, T. I. A., Saris, W. H. M. & NUGENOB Consortium (2009). Several obesity- and nutrient-related gene polymorphisms but not FTO and UCP variants modulate postabsorptive resting energy expenditure and fat-induced thermogenesis in obese individuals: the NUGENOB study. International Journal of Obesity, 33(6), 669-79. https://doi.org/10.1038/ijo.2009.59

Bilde, T., Maklakov, A. A., Meisner, K., la Guardia, L. & Friberg, U. (2009). Sex differences in the genetic architecture of lifespan in a seed beetle: extreme inbreeding extends male lifespan. BMC Evolutionary Biology, 9(33). https://doi.org/10.1186/1471-2148-9-33

Martisová, M., Bilde, T. & Pekar, S. (2009). Sex-specific kleptoparasitic foraging in ant-eating spiders. Animal Behaviour, 78, 1115-1118. https://doi.org/10.1016/j.anbehav.2009.07.025

Laidre, K. L., Heagerty, P. J., Heide-Jørgensen, M. P., Witting, L. & Simon, M. J. (2009). Sexual segregation of common minke whales (Balaenoptera acutorostrata) in Greenland, and the influence of sea temperatureon the sex ratio of catches. I C E S Journal of Marine Science, (66), 1-14.

Zinner, N. T., Mølmer, K., Özen, C., Dean, D. J. & Langanke, K. (2009). Shell-model Monte Carlo simulations of the BCS-BEC crossover in few-fermion systems. Physical Review A, 80(013613). https://doi.org/10.1103/PhysRevA.80.013613

Dalsgaard, T., Moldt, B., Sharma, N., Wolf, G., Schmitz, A., Pedersen, F. S. & Mikkelsen, J. G. (2009). Shielding of Sleeping Beauty DNA Transposon-delivered Transgene Cassettes by Heterologous Insulators in Early Embryonal Cells. Molecular Therapy, 17(1), 121-130. https://doi.org/10.1038/mt.2008.224

Treier, U., Broennimann, O., Guisan, A., Schaffner, U., Steinger, T. & Müller-Schärer, H. (2009). Shift in cytotype frequency and niche space in the invasive plant Centaurea maculosa. Poster session presented at Niche Evolution Conference, Zürich, Switzerland.

Treier, U. A., Broennimann, O., Normand, S., Guisan, A., Schaffner, U., Steinger, T. & Müller-Schärer, H. (2009). Shift in cytotype frequency and nich space in the invasive plant Centaurea maculosa. Ecology, 90(5), 1366-1377.

Karoff, C. (2009, Jan 31). Shooting stars.

Schneeberger, K., Ossowski, S., Lanz, C., Juul, T., Petersen, A. H., Nielsen, K. L., Jørgensen, J.-E., Weigel, D. & Andersen, S. U. (2009). SHOREmap: simultaneous mapping and mutation identification by deep sequencing. Nature Methods, 6(8), 550-1. https://doi.org/10.1038/nmeth0809-550

Pedersen, M. S. S., Weber, F. & Madsen, J. (2009). Signature deconfinement with spin-down compression in cooling hybrid stars. Astrophysical Journal, 694(2), 1019-1033. https://doi.org/10.1088/0004-637X/694/2/1019

Lind, K., Primas, F., Charbonnel, C., Grundahl, F. & Asplund, M. (2009). Signatures of intrinsic Li depletion and Li-Na anti-correlation in the metal-poor globular cluster NGC 6397. Astronomy & Astrophysics (A&A), 503(2), 545-557. https://doi.org/10.1051/0004-6361/200912524

Kristensen, M. (2009). Silicon-on-insulator optical components for communication and sensors. Abstract from Conference on sensors, Rio de Janeiro, Brazil.

Larsen, K. (2009). Silurus glanis alpha-synuclein (SNCA) mRNA, partial cds.GenBank Access. No. GQ169722. Dataset

Seiferlin, K., Ehrenfreund, P., Garry, J., Gunderson, K., Hütter, E., Kargl, G., Maturilli, A. & Merrison, J. P. (2009). Simulating Martian regolith in the laboratory. Planetary and Space Science, 56(15), 2009-2025. https://doi.org/10.1016/j.pss.2008.09.017

Hobolth, A. & Stone, E. (2009). Simulation from endpoint-conditioned, continuous-time Markov chains on a finite state space, with applications to molecular evolution. Annals of Applied Statistics, 3(3), 1204-1231. https://doi.org/10.1214/09-AOAS247

Kube, R., Bracht, H., Hansen, J. L., Nylandsted Larsen, A., Haller, E. E., Paul, S. & Lerch, W. (2009). Simultaneous diffusoin of Si and Ge in isotopically controlled Si_1-x heterostructures. Materials Science in Semiconductor Processing, 11(5-6), 378-383. https://doi.org/10.1016/j.mssp.2008.07.005

Frenck, G., Linden, L., Mikkelsen, T., Brix, H. & Jørgensen, R. B. (2009). Single and interactive effects of elevated temperature (CO₂) and (O₃) on the population structure of crop plants. Poster session presented at Adaptation Potential in Plants - FEBS Workshop, Wien, Austria.

Moreno, O., Rodriguez, R. A., Sarriguren, P., Moya de Guerra, E., Simkovic, F. & Faessler, A. (2009). Single- and low-lying-states dominance in two-neutrino double-beta decay. Journal of Physics G: Nuclear and Particle Physics, 36(1), 015106. https://doi.org/10.1088/0954-3899/36/1/015106

Metzler, R., Ambjörnsson, T., Hanke, A. & Fogedby, H. (2009). Single DNA denaturation and bubble dynamics. Journal of Physics: Condensed Matter, 21(034111). https://doi.org/10.1088/0953-8984/21/3/034111

Kristensen, L. K. (2009). Single lunation N-observation orbits. Celestial Mechanics and Dynamical Astronomy, 105, 275-287. https://doi.org/10.1007/s10569-009-9226-1

Stougaard, M., Lohmann, J. S., Mancino, A., Celik, S., Andersen, F. F., Koch, J. & Knudsen, B. R. (2009). Single-molecule detection of human topoisomerase I cleavage-ligation activity. A C S Nano, 3(1), 223-33. https://doi.org/10.1021/nn800509b

Kuimova, M. K., Yahioglu, G. & Ogilby, P. R. (2009). Singlet Oxygen in a Cell: Spatially Dependent Lifetimes and Quenching Rate Constants. Journal of the American Chemical Society, 131, 332-340.

Tran, T. T., Herfort, D., Jakobsen, H. J. & Skibsted, J. (2009). Site Preferences of Fluoride Guest Ions in the Calcium Silicate Phases of Portland Cement from ²⁹Si{¹⁹F} CP-REDOR NMR Spectroscopy. Journal of the American Chemical Society, 131(40), 14170-14171. https://doi.org/10.1021/ja905223d

Jakobsen, H. J., Bildsøe, H. K., Skibsted, J., Brorson, M., Srinivasan, B. R., Bensch, W. & Hansen, M. R. (2009). Site Preferences of NH4⁺ in Its Solid Solutions with Cs₂WS₄ and Rb₂WS₄ from ¹⁴N, ³³S, ⁸⁷Rb, and ¹³³Cs MAS NMR. Poster session presented at 50^th Experimental NMR Conference, Asilomar, Pacific Groove, California, United States.

Jakobsen, H. J., Bildsøe, H. K., Skibsted, J., Hansen, M. R., Brorson, M., Srinivasan, B. R. & Bensch, W. (2009). Site Preferences of NH₄⁺ in its Solid Solutions with Cs₂WS₄ and Rb₂WS₄ from Multinuclear Solid-State NMR. Inorganic Chemistry, 48(5), 1787-1789.

Jakobsen, H. J., Bildsøe, H. K., Skibsted, J., Hansen, M. R., Brorson, M., Srinivasan, B. R., Srinivasan, B. R. & Bensch, W. (2009). Site Preferences of NH₄⁺in Its Solid Solutions with Cs₂WS₄ and Rb₂WS₄ from ¹⁴N, ³³S, ⁸⁷Rb, and ¹³³Cs MAS NMR. Poster session presented at 50^th Experimental NMR Conference, Asilomar, Pacific Groove, California, United States.

Larsen, E. K. U., Nielsen, T., Wittenborn, T., Birkedal, H., Vorup-Jensen, T., Jakobsen, M. H., Østergaard, L., Horsman, M. R., Besenbacher, F., Howard, K. A. & Kjems, J. (2009). Size-Dependent Accumulation of PEGylated Silane-Coated Magnetic Iron Oxide Nanoparticles in Murine Tumors. A C S Nano, 3(7), 1947-51. https://doi.org/10.1021/nn900330m

Christensen, H. B. & Hansen, K. M. (2009). Slutrapport, forår 2009: Software Architecture at Work: teknisk rapport, nr. 3. Department of Computer Science, Aarhus University.

Poulsen, U. V. (2009). Small atomic ensembles interacting with light. Poster session presented at SCALA Conference 2009, International Conference on Scalable Quantum Computing with Light and Atoms, Cortina, Italy.

Eberle, A., Lykke-Andersen, S., Mühlemann, O. & Jensen, T. H. (2009). SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells. Nature Structural and Molecular Biology, 16(1), 49-55.

Burow, E., Nielsen, T. R., Halekoh, U. & Knierim, U. (2009). Social interactions of dairy cows introduced postpartally to a separated barn section - pilot study. Acta Agriculturae Scandinavica, Section A - Animal Science, 59, 192-196. https://doi.org/10.1080/09064700903160710

Borchorst, N. G. (2009). Social Navigation and User Contributions within the Sphere of Public Digital Services. In J. Molka-Danielsen (Ed.), Proceedings of the 32nd Information Systems Research Seminar in Scandinavia, IRIS 32, Inclusive Design TAPIR Akademisk Forlag. http://www.himolde.no/index.cfm/pageID/2483

Hjarvard, B. M., Larsen, O. N., Juul-Madsen, H. R., Jørgensen, E. & Jensen, K. H. (2009). Social Rank Influences the Distribution of Blood Leukocyte Subsets in Female Growing pigs. Scandinavian Journal of Laboratory Animal Science, 36(4), 309-320.

Bielikova, M., Nielsen, M., Kucera, A., Miltersen, P. B., Palamidessi, C., Tuma, P. & Valencia, F. (Eds.) (2009). SOFSEM 2009: Theory and Practice of Computer Science: 35th Conference on Current Trends in Theory and Practice of Computer Science, Špindleruv Mlýn, Czech Republic, January 24-30, 2009. Proceedings. Springer. Lecture Notes in Computer Science Vol. 5404 https://doi.org/10.1007/978-3-540-95891-8

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