Publications

Follow the latest publications from the Faculty of Natural Sciences.

de Vos, J. M., Streiff, S. J. R., Bachelier, J. B., Epitawalage, N., Maurin, O., Forest, F. & Baker, W. J. (2024). Phylogenomics of the pantropical Connaraceae: revised infrafamilial classification and the evolution of heterostyly. Plant Systematics and Evolution, 310(4), Article 29. https://doi.org/10.1007/s00606-024-01909-y

Mosquera Chaverra, L., Paredes Cuervo, D., López Gutiérrez, A., Arias, C. A. & Carvalho, P. N. (2024). Phytoremediation of Mercury Contamination: Bibliometric Analysis. Sustainability, 16(21), Article 9408. https://doi.org/10.3390/su16219408

Andresen, K. J. (2024). Pilot study for source pollution detection and risk assessment practices for historical wrecks with and without ammunition: Applications for condition assessment of Danish coastal waters within the EU Water Frame-work Directive. Miljøstyrelsen. https://www2.mst.dk/Udgiv/publications/2024/02/978-87-7038-587-9.pdf

Grønbæk, T. H. (2024). piRNA-mediated Regulation of Transposons in the Developing Germline of Drosophila melanogaster. [PhD dissertation, Aarhus University].

Halbritter, A. H., Vandvik, V., Cotner, S. H., Farfan-Rios, W., Maitner, B. S., Michaletz, S. T., Oliveras Menor, I., Telford, R. J., Ccahuana, A., Cruz, R., Sallo-Bravo, J., Santos-Andrade, P. E., Vilca-Bustamante, L. L., Castorena, M., Chacón-Labella, J., Christiansen, C. T., Duran, S. M., Egelkraut, D. D., Gya, R. ... Enquist, B. J. (2024). Plant trait and vegetation data along a 1314 m elevation gradient with fire history in Puna grasslands, Perú. Scientific Data, 11(1), Article 225. https://doi.org/10.1038/s41597-024-02980-3

Aumüller, M., Janos Lebeda, C., Nelson, B. & Pagh, R. (2024). PLAN: Variance-Aware Private Mean Estimation. In Proceedings on Privacy Enhancing Technologies (pp. 606-625) https://doi.org/10.56553/popets-2024-0095

Teodori, L., Kroer, S., Omer, M., Andersen, V. L., Bech, P., Su, J., Bridoux, J., Nielsen, J. S., Bertelsen, M. B., Hernot, S., Gothelf, K. V. & Kjems, J. (2024). Plug-and-play nucleic acid-mediated multimerization of biparatopic nanobodies for molecular imaging. Molecular Therapy - Nucleic Acids, 35(3), Article 102305. https://doi.org/10.1016/j.omtn.2024.102305

Piotrowski, J. A. (2024). Pod lądolodami plejstoceńskimi: co wiemy a o czym tylko spekulujemy (Under the Pleistocene ice sheets: knowledge and speculations). 106-107. Abstract from XIII Assembly of the Association of Polish Geomorphologists, Lodz, Poland.

Jespersen, E. A., Dybdahl, A.-K., Jensen, J. S., Laustsen, A. & Arias, C. A. (2024). Pollutant Removal in Bioswales. Abstract from 18th Annual DWF Water Research Conference, Copenhagen, Denmark.

Mundy, J., Hall, A. S. M., Steinbach, J., Albinaña, C., Agerbo, E., Als, T. D., Thapar, A., McGrath, J. J., Vilhjálmsson, B. J., Nordentoft, M., Werge, T., Børglum, A., Mortensen, P. B. & Musliner, K. L. (2024). Polygenic liabilities and treatment trajectories in early-onset depression: a Danish register-based study. Psychological Medicine, 54(14), 3828-3837. https://doi.org/10.1017/S0033291724002186

Jefsen, O. H., Holde, K., McGrath, J. J., Rajagopal, V. M., Albiñana, C., Vilhjálmsson, B. J., Grove, J., Agerbo, E., Yilmaz, Z., Plana-Ripoll, O., Munk-Olsen, T., Demontis, D., Børglum, A., Mors, O., Bulik, C. M., Mortensen, P. B. & Petersen, L. V. (2024). Polygenic risk of mental disorders and subject-specific school grades. Biological Psychiatry, 96(3), 222-229. https://doi.org/10.1016/j.biopsych.2023.11.020

Brodszkij, E., Ryberg, C., Lyons, J. A., Juhl, D. W., Nielsen, N. C., Sigalas, N. I., Lyulin, A. V., Pedersen, J. S. & Städler, B. (2024). Poly(Sitosterol)-Based Hydrophobic Blocks in Amphiphilic Block Copolymers for the Assembly of Hybrid Vesicles. Small, 20(40), Article 2401934. https://doi.org/10.1002/smll.202401934

Ma, X., Dong, R., Hughes, A., Corlett, R. T., Svenning, J. C. & Feng, G. (2024). Population trends are more strongly linked to environmental change and species traits in birds than mammals. Proceedings of the Royal Society B: Biological Sciences, 291(2033), 20241395. Article 20241395. https://doi.org/10.1098/rspb.2024.1395

Zhu, Y., Honnet, C., Kang, Y., Zhu, J., Zheng, A. J., Heinz, K., Tang, G., Musk, L., Wessely, M. & Mueller, S. (2024). PortaChrome: A Portable Contact Light Source for Integrated Re-Programmable Multi-Color Textures. In UIST 2024 - Proceedings of the 37th Annual ACM Symposium on User Interface Software and Technology: Proceedings of the 37th Annual ACM Symposium on User Interface Software and Technology (pp. 1-13). Article 18 Association for Computing Machinery. https://doi.org/10.1145/3654777.3676458

Zou, Y., Zohner, C. M., Ma, H., Merder, J., Berdugo, M., Bialic-Murphy, L., Mo, L., Zimmermann, N. E., Liang, J., de-Miguel, S., Nabuurs, G. J., Reich, P. B., Niinements, U., Dahlgren, J., Kändler, G., Ratcliffe, S., Ruiz-Benito, P., de Zavala, M. A., Crowther, T. W. & GFBI consortium (2024). Positive feedbacks and alternative stable states in forest leaf types. Nature Communications, 15(1), Article 4658. https://doi.org/10.1038/s41467-024-48676-5

Zymaroieva, A., Kolomiychuk, V., Fedoniuk, T., Goncharenko, I., Borsuk, O., Melnychuk, T. & Svenning, J. C. (2024). Post-fire recovery of vegetation in the Chornobyl Radiation and Ecological Biosphere Reserve. International Journal of Environmental Studies, 81(1), 489-509. https://doi.org/10.1080/00207233.2023.2287345

Daviray, M., Geslin, E., Risgaard-Petersen, N., Scholz, V. V., Fouet, M. & Metzger, E. (2024). Potential impacts of cable bacteria activity on hard-shelled benthic foraminifera: implications for their interpretation as bioindicators or paleoproxies. Biogeosciences, 21(4), 911-928. https://doi.org/10.5194/bg-21-911-2024

Ghouse, J., Ahlberg, G., Rand, S. A., Olesen, M. S., Vilhjalmsson, B., Stender, S. & Bundgaard, H. (2024). Potential Influence of Risk Factor Control on the Association Between Lipoprotein(a) and Atherosclerotic Cardiovascular Disease. Arteriosclerosis, Thrombosis, and Vascular Biology, 44(6), 1455-1457. https://doi.org/10.1161/ATVBAHA.124.320990

Pastor-López, E. J., Escolà, M., Kisielius, V., Arias, C. A., Carvalho, P. N., Gorito, A. M., Ramos, S., Freitas, V., Guimarães, L., Almeida, C. M. R., Müller, J. A., Küster, E., Kilian, R. M., Diawara, A., Ba, S. & Matamoros, V. (2024). Potential of nature-based solutions to reduce antibiotics, antimicrobial resistance, and pathogens in aquatic ecosystems. a critical review. Science of the Total Environment, 946, Article 174273. https://doi.org/10.1016/j.scitotenv.2024.174273

Essl, F., García-Rodríguez, A., Lenzner, B., Alexander, J. M., Capinha, C., Gaüzère, P., Guisan, A., Kühn, I., Lenoir, J., Richardson, D. M., Rumpf, S. B., Svenning, J. C., Thuiller, W., Zurell, D. & Dullinger, S. (2024). Potential sources of time lags in calibrating species distribution models. Journal of Biogeography, 51(1), 89-102. https://doi.org/10.1111/jbi.14726

Filos-Ratsikas, A., Hansen, K. A., Høgh, K. & Hollender, A. (2024). PPAD-Membership for Problems with Exact Rational Solutions: A General Approach via Convex Optimization. In B. Mohar, I. Shinkar & R. O'Donnell (Eds.), STOC 2024 - Proceedings of the 56th Annual ACM Symposium on Theory of Computing (pp. 1204-1215). Association for Computing Machinery. https://doi.org/10.1145/3618260.3649645

Wong, E., Esquivel, J. S., Leiva, G., Grønbæk, J. E. & Velloso, E. (2024). Practice-informed Paterns for Organising Large Groups in Distributed Mixed Reality Collaboration. In CHI 2024 - Proceedings of the 2024 CHI Conference on Human Factors in Computing Sytems Article 1030 Association for Computing Machinery. https://doi.org/10.1145/3613904.3642502

Bang Jensen, B., Thorup, V. M., Foldager, L., Nielsen, K. V., Frandsen, M., Pastell, M. & Krogh, M. A. (2024). Precision fish farming in recirculated aquaculture systems - from theory to implementation. Poster session presented at 17th International Symposium on Veterinary Epidemiology and Economics, Sydney, New South Wales, Australia. https://isvee2024-c10000.eorganiser.com.au/data/clients/1/791/submissions/177854/abstract.pdf

Goupil, M. J., Catala, C., Samadi, R., Belkacem, K., Ouazzani, R. M., Reese, D. R., Appourchaux, T., Mathur, S., Cabrera, J., Börner, A., Paproth, C., Moedas, N., Verma, K., Lebreton, Y., Deal, M., Ballot, J., Chaplin, W. J., Christensen-Dalsgaard, J., Cunha, M. ... Hatt, E. (2024). Predicted asteroseismic detection yield for solar-like oscillating stars with PLATO. Astronomy and Astrophysics, 683, Article A78. https://doi.org/10.1051/0004-6361/202348111

Greussing, E., Guenther, L., Baram-Tsabari, A., Dabran-Zivan, S., Jonas, E., Klein-Avraham, I., Taddicken, M., Beets, B., Brossard, D., Chakraborty, A., Agergaard, T. E., Fage-Butler, A., Ju Huang, C., Nielsen, K. H., Kankaria, S., Lo, Y.-Y., Riedlinger, M. & Song, H. J. (2024). Predicting and describing the use of generative AI in science-related information search: Insights from a multinational survey. Abstract from Annual Conference of the “Science Communication” Division of the German Communication Association 2024, Zürich, Switzerland. https://www.ikmz.uzh.ch/dam/jcr:f29f21aa-1025-4b39-b848-4aefbd13a781/AI&SCICOMM24_Book%20of%20Abstracts.pdf

Luige, J., Armaos, A., Tartaglia, G. G. & Ørom, U. A. V. (2024). Predicting nuclear G-quadruplex RNA-binding proteins with roles in transcription and phase separation. Nature Communications, 15, Article 2585. https://doi.org/10.1038/s41467-024-46731-9

Jensen, M. S., Madsen, R. B., Salionov, D. & Glasius, M. (2024). Predicting the chemical composition of biocrude from hydrothermal liquefaction of biomasses using a multivariate statistical approach. Sustainable Energy and Fuels, 8(17), 3877-3891. https://doi.org/10.1039/d4se00860j

Foldager, L., Thorup, V. M., Pastell, M., Jensen, B. B. & Krogh, M. A. (2024). Prediction of mortality in land-based recirculating aquaculture system (RAS) trout farms. In P. Linde (Ed.), Symposium i Anvendt Statistik 2024 (pp. 17-24). Økonomisk Institut, Københavns Universitet & Symposium i Anvendt Statistik. http://www.statistiksymposium.dk/Symposium 2024 WEB.pdf

Thorup, V. M., Foldager, L., Pastell, M., Frandsen, M., Jensen, B. B. & Krogh, M. A. (2024). Prediction of mortality in recirculation aquaculture systems. Poster session presented at AQUA Conference 2025, Copenhagen, Denmark.

Schindler, S. (2024). Predictivism and avoidance of ad hoc-ness: an empirical study. Studies in History and Philosophy of Science Part A, 104, 68–77. https://doi.org/10.1016/j.shpsa.2023.11.008

Nimptsch, K., Aydin, E. E., Chavarria, R. F. R., Janke, J., Poy, M. N., Oxvig, C., Steinbrecher, A. & Pischon, T. (2024). Pregnancy associated plasma protein-A2 (PAPP-A2) and stanniocalcin-2 (STC2) but not PAPP-A are associated with circulating total IGF-1 in a human adult population. Scientific Reports, 14(1), Article 1770. https://doi.org/10.1038/s41598-024-52074-8, https://doi.org/10.1038/s41598-024-52074-8

Kristiansen, S. M., Delle Grazie, F. M. & Kähler Holst, M. (2024). Prehistoric use of three buildings: evidence from multi-element mapping of subsoil. In A. Pedersen, M. D. Jessen & M. K. Holst (Eds.), Jelling : Monuments and Landscape (pp. 215-224). Syddansk Universitetsforlag.

Ottosen, R. N., Seefeldt, J. M., Hansen, J., Nielsen, R., Møller, N., Johannsen, M. & Poulsen, T. B. (2024). Preparation and Preclinical Characterization of a Simple Ester for Dual Exogenous Supply of Lactate and Beta-hydroxybutyrate. Journal of Agricultural and Food Chemistry, 72(36), 19883-19890. https://doi.org/10.1021/acs.jafc.4c04849

Morigi, D. (2024). Presentations of Braid Groups of Type A Arising from (m+2)-angulations of Regular Polygons. Algebras and Representation Theory, 27(2), 1237-1265. https://doi.org/10.1007/s10468-024-10257-x

Lundgren, E. J., Wallach, A. D., Svenning, J. C., Schlaepfer, M. A., Andersson, A. L. A. & Ramp, D. (2024). Preventing extinction in an age of species migration and planetary change. Conservation Biology, 38(6), Article e14270. https://doi.org/10.1111/cobi.14270

Toft, S., Albuquerque, C., Degn, N., Kjærby, H. & Kyneb, S. (2024). Prey killing rate of a generalist predator may be enhanced by macronutrient manipulation. BioControl, 69(2), 145-155. https://doi.org/10.1007/s10526-024-10251-8

Wooster, E. I. F., Ramp, D., Lundgren, E. J., Bonsen, G. T., Geisler-Edge, A., Ben-Ami, D., Carthey, A. J. R., Carroll, S., Keynan, O., Olek, Y., O'Neill, A., Shanas, U. & Wallach, A. D. (2024). Prey responses to foxes are not determined by nativeness. Ecography, 2024(4), Article e07031. https://doi.org/10.1111/ecog.07031

Zaru, N., Silvestri, S., Assiri, M., Bai, P., Hansen, T. M. & Vignoli, G. (2024). Probabilistic Petrophysical Reconstruction of Danta's Alpine Peatland via Electromagnetic Induction Data. Earth and Space Science, 11(3), Article e2023EA003457. https://doi.org/10.1029/2023EA003457

Madzharova, F., Chatterley, A. S., Roeters, S. J. & Weidner, T. (2024). Probing Backbone Coupling within Hydrated Proteins with Two-Color 2D Infrared Spectroscopy. The Journal of Physical Chemistry Letters, 15(18), 4933-4939. https://doi.org/10.1021/acs.jpclett.4c00401

Bednarz, A., Rosendal, R. T., Lund, L. M. & Birkedal, V. (2024). Probing G-quadruplex-ligand binding using DNA intrinsic fluorescence. Biochimie, 227(Part A), 61-67. https://doi.org/10.1016/j.biochi.2024.06.009

Terry, L. M., Foreman, M. M., Rasmussen, A. P., McCoy, A. B. & Weber, J. M. (2024). Probing Ion−Receptor Interactions in Halide Complexes of Octamethyl Calix[4]Pyrrole. Journal of the American Chemical Society, 146(18), 12401-12409. https://doi.org/10.1021/JACS.3C13445

Diessel, O. K., Von Milczewski, J., Christianen, A. & Schmidt, R. (2024). Probing molecular spectral functions and unconventional pairing using Raman spectroscopy. Physical Review Research , 6(2), Article 023239. https://doi.org/10.1103/PhysRevResearch.6.023239

Sneftrup, P. S., Juergens, P., De Michele, V., Andrade, J. R. C., Vrakking, M. J. J., Balling, P. & Mermillod-Blondin, A. (2024). Probing nonlinear excitation conditions: photoluminescence and nonlinear absorption studies in laser-irradiated dielectrics. Applied Physics A: Materials Science & Processing, 130(3), Article 175. https://doi.org/10.1007/s00339-024-07311-2

Skaanvik, S. A. & Gateman, S. M. (2024). Probing passivity of corroding metals using scanning electrochemical probe microscopy. Electrochemical Science Advances, 4(5), Article e2300014. https://doi.org/10.1002/elsa.202300014

Nielsen, K. H. (2024). Problemet med Central Park. Weekendavisen, Sektion 4 (Ideer), 5.

Naveed, K., Madsen, L. M., Grombacher, D. & Larsen, J. J. (2024). Processing Time-domain Induced Polarization Data Using Variational Mode Decomposition. IEEE Transactions on Geoscience and Remote Sensing, 62, 1-13. Article 5905713. https://doi.org/10.1109/TGRS.2024.3362290

Nielsen, K. H. (2024). Professorens prutter. Weekendavisen, Sektion 4 (Ideer), 5.

Malle, M. G., Song, P., Löffler, P. M. G., Kalisi, N., Yan, Y., Valero, J., Vogel, S. & Kjems, J. (2024). Programmable RNA Loading of Extracellular Vesicles with Toehold-Release Purification. Journal of the American Chemical Society, 146(18), 12410-12422. https://doi.org/10.1021/JACS.3C13123

Stassen, P. J. A. (2024). Programming language semantics in modal type theories. [PhD dissertation, Aarhus University]. Department of Computer Science, University of Aarhus.

Last, K. B., Malte, H., Rindom, E., Guagnoni, I. N. & Wang, T. (2024). Proportional increment of oxygen consumption, heart rate and core body temperature in the digesting Python bivittatus. Journal of Experimental Biology, 227(19), Article jeb248021. https://doi.org/10.1242/jeb.248021

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