Publications

Follow the latest publications from the Faculty of Natural Sciences.

Brameier, M. & Wiuf, C. (2007). Ab initio identification of human micoRNAs based on structure motifs.. Poster session presented at ISMB/ECCB 2007, Wien, Austria.

Brameier, M. & Wiuf, C. (2007). Ab initio identification of human miRNAs for genome scanning based on structure motifs. BMC. Bioinformatics, 8(478).

Klose, A. & Görtz, S. (2007). A branch-and-price algorithm for the capacitated facility location problem. European Journal of Operational Research, 179(3), 1109-1125. https://doi.org/10.1016/j.ejor.2005.03.078

Kilbane, D., Folkmann, F., Bizau, J.-M., Banahan, C., Scully, S., Kjeldsen, H., van Kampen, P., Mansfield, M. W. D., Costello, J. T. & West, J. B. (2007). Absolute photoionization cross-section measurements of the Kr I isoelectronic sequence. Physical Review A, 75.

Hansen, J. E., Kjeldsen, H., Folkmann, F., Martins, M. & West, J. B. (2007). Absolute photoionization cross sections of the ions Ca⁺-Ni⁺. Journal of Physics B: Atomic, Molecular and Optical Physics, 40, 293-327.

Svenningsen, L. & Jacobsen, B. H. (2007). Absolute S-velocity estimation from receiver functions. Geophysical Journal International, 170, 1089-1138.

Lee, J. (2007). A Case for Dynamic Reverse-code Generation. BRICS Report Series, (RS-07-15).

Ørsted, B. & Vargas, J. (2007). A cauchy problem for elliptic invariant differential operators and continuity of a generalized Berezin transform. Annales de l'Institut Fourier, 57(3), 693-702.

Svenningsen, L., Balling, N., Jacobsen, B. H., Kind, R., Wylegalla, K. & Schweitzer, J. (2007). Accurate depths to Moho beneath the highlands of southern Norway resolved by teleseismic receiverfunctions. In Geophysical Research Abstracts (Vol. 9, pp. 2719). European Geophysical Union.

Finke, N., Vandieken, V. & Jørgensen, B. B. (2007). Acetate, lactate, propionate, and isobutyrate as electron donors for iron and sulfate reduction in Arctic marine sediments, Svalbard. FEMS Microbiology Ecology, 59, 10-22. https://doi.org/10.1111/j.1574-6941.2006.00214.x

Larsen, N. K., Piotrowski, J. A., Menzies, J., Christiansen, F., Christoffersen, P. & Wysota, W. (2007). A comparison of microstructures from basal tills and synthetically deformed sediments, and its implications for till formation. Abstract from 27th Nordic Geological Winter Meeting, Oulu, Finland.

Støvring, K. & Lassen, S. B. (2007). A Complete, Co-Inductive Syntactic Theory of Sequential Control and State. In Proceedings of the 34th Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Languages (Vol. 42, Issue1, pp. 161-172). Society for Industrial and Applied Mathematics.

Biernacka, M. & Danvy, O. (2007). A Concrete Framework for Environment Machines. A C M Transactions on Computational Logic, 9(1), 1-30.

Dantan, A., Cviklinski, J., Ortalo, J., Giacobino, E. & Pinard, M. (2007). A continuous-variable quantum memory for light. Abstract from CLEOE-IQEC 2007, Munich, Germany. https://doi.org/10.1109/CLEOE-IQEC.2007.4386758

Naysmith, P., Scott, E. M., Cook, G. T., Heinemeier, J., van der Plicht, J., Van Strydonck, M., Ramsey, C. B., Grootes, P. M. & Freeman, S. P. H. T. (2007). A cremated bone intercomparison study. Radiocarbon: An International Journal of Cosmogenic Isotope Research, 49(2), 403-408.

Sivertsen, A. C., Gasior, M., Bjerring, M., Hansen, S. U., Lopez, O. L., Nielsen, N. C. & Bols, M. (2007). Active Site Protonation of 1-Azafagomine in Glucosidases Studied by Solid-State NMR Spectroscopy. European Journal of Organic Chemistry, 1735-1742. https://doi.org/10.1002/ejoc.200600816

Brynskov, M. (2007). Activity-Based Design as a Way to Bridge Artifacts, Professions, and Theories. In C. Brodersen, S. Bødker & C. N. Klokmose (Eds.), Multiple and Ubiquitous Interaction, 28. - 30. March 2007: Book of Abstracts (pp. 21-24)

Holmstrup, M., Overgaard, J., Bindesbøl, A.-M., Pertoldi, C. & Bayley, M. (2007). Adaptations to overwintering in the earthworm Dendrobaena octaedra: Genetic differences in glucose loading and freeze tolerance. Soil Biology & Biochemistry, 39, 2640-2650. https://doi.org/10.1016/j.soilbio.2007.05.018

Larsen, P. F., Nielsen, E. E., Williams, T. D., Hemmer-Hansen, J., Chipman, J. K., Kruhøffer, M., Grønkjær, P., George, S. G., Andersen, L. D. & Loeschcke, V. (2007). Adaptive differences in gene expression in European flounder (Platichthys flesus). Molecular Ecology, 16(22), 4674-83. https://doi.org/10.1111/j.1365-294X.2007.03530.x

De Mita, S., Santoni, S., Ronfort, J. & Bataillon, T. (2007). Adaptive evolution of the symbiotic gene NORK is not correlated with shifts of rhizobial specificity in the genus Medicago. BMC Evolutionary Biology, 7. https://doi.org/10.1186/1471-2148-7-210

Wang, H., Schwefel, H.-P. & Toftegaard, T. S. (2007). Adaptive Modulation for a Downlink Multicast Channel in OFDMA Systems. In IEEE Wireless Communications and Networking Conference. WCNC 2007. (pp. 650-655). IEEE Computer Society Press. https://doi.org/10.1109/WCNC.2007.125

Brion, E., Pedersen, L. H. & Mølmer, K. (2007). Adiabatic Elimination in a Lambda System. J. Phys. A: Math. Theor., 40, 1033-1043.

Watabe, S., Nikuni, T., Nygaard, N., Williams, J. E. & Clark, C. W. (2007). Adiabatic Phase Diagram of a Degenerate Fermi Gas with a Feshbach Resonance. Journal of Low Temperature Physics, 148(3-4), 435-440.

Watabe, S., Nikuni, T., Nygaard, N., Williams, J. E. & Clark, C. W. (2007). Adiabatic Phase Diagram of an Ultracold Atomic Fermi Gas with a Feshbach Resonance. Journal of the Physical Society of Japan, 76(064003).

Nielsen, J. D. & Schwartzbach, M. I. (2007). A Domain-Specific Programming Language for Secure Multiparty Computation. In Preceedings of the 2007 ACM SIGPLAN Workshop on Programming Languages and Analysis for Security (pp. 21-31). Society for Industrial and Applied Mathematics. https://doi.org/10.1145/1255329.1255333

Kingshott, P. & Hoecker, H. (2007). Adsorption of proteins: Assessment methods. In P. Somasundaran (Ed.), Encyclopedia of Surface and Colloid Science (2. ed., Vol. 5, pp. 669-694). Taylor & Francis.

Jakobsen, H. J., Hove, A. R., Bildsøe, H. K., Skibsted, J. & Brorson, M. (2007). Advancements in natural abundance solid-state ³³S MAS NMR: characterization of transition-metal M=S bonds in ammonium tetrathiometallates. Chemical Communications, 1629-1631.

Hansen, D. M. & Olesen, J. M. (2007). Æder Komodovaranen frugt? CAMPUS.

Aagaard, L., Amarzguioui, M., Sun, G., Santos, L. C., Ehsani, A., Prydz, H. & Rossi, J. J. (2007). A Facile Lentiviral Vector System for Expression of Doxycycline-Inducible shRNAs: Knockdown of the Pre-miRNA Processing Enzyme Drosha. Molecular Therapy, 15(5), 938-945. https://doi.org/10.1038/sj.mt.6300118

Hendriks, B., Andriessen, P., Huigen, Y., Leighton, C., Redfield, T., Murrell, G., Gallagher, K. & Nielsen, S. B. (2007). A Fission Track Data Compilation for Fennoscandia. Norsk Geologisk Tidsskrift, 87, 143-155.

Tirichine, L., Sandal, N. N., Madsen, L. H., Radutoiu, E. S., Albrektsen, A. S., Sato, S., Asamizu, E., Tabata, S. & Stougaard, J. (2007). A gain-of-function mutation in a cytokinine receptor triggers spontaneous root nodule organogenesis. Science, 315, 104-107.

Westergaard, M. (2007). A Game-theoretic View on Behavioural Visualisation. In A. Cerone & P. Curzon (Eds.), Electronic Notes in Theoretical Computer Science: Proceedings of the 2nd International Workshop on Formal Methods for Interactive Systems (FMIS 2007) (Vol. 208, pp. 113-129). Pergamon Press.

Boisen, L., Rattan, S. & Kristensen, P. (2007). Ageing and Angiogenesis. Poster session presented at Matrix Pathobiology, Signaling and Molecular Targets, Patras, Greece.

Norberg, E. & Guldbrandtsen, B. (2007). A gentleman scientist. Acta Agriculturae Scandinavica, Section A - Animal Science, 57(4), 173-174. https://doi.org/10.1080/09064700801959254

Lamy, P., Andersen, C. L., Andersen, L. D., Tørring, N. & Wiuf, C. (2007). A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays. BMC Bioinformatics, 8(434).

Ran, L., Jiang, H., Knudsen, K. L. & Eiríksson, J. (2007). A high-resolution Holocene diatom record on the North Icelandic shelf. Abstract from International Conference on Paleoceanography (ICP9), Shanghai, China.

Kraft, S. D., Mikosch, J., Staanum, P. F., Deiglmayr, J., Lange, J., Fioretti, A. & Wester, R. (2007). A high-resolution time-of-flight mass spectrometer for the detection of ultracold molecules. Applied Physics B: Lasers and Optics, 89(453).

Schyth, B. D., Lorenzen, N. & Pedersen, F. S. (2007). A High Throughput In Vivo Model for Testing Delivery and Antiviral Effects of siRNAs in Vertebrates. Mol. Ther., 15, 1366-1372.

Stubkjær, J., Wåhlin, P., Olesen, H. R., Ketzel, M., Bossi, R., Palmgren, F. & Glasius, M. (2007). Air pollution from domestic wood combustion. In Conference proceedings of NOSA Aerosol Symposium, Helsingør, Denmark, 8-9 November, 2007 in connection with NMR workshop "Organic particles in Nordic urban areas" 7 November 2007: Available at http://www.dmu.dk/nosa2007 (pp. 96)

Andresen, K. J., Clausen, O. R. & Huuse, M. (2007). A large-scale middle Miocene carbonate (?) mound structure in the Norwegian-Danish Basin: evidence for hydrocarbon migration?. Abstract from AGU 2007 Fall Meeting, San Francisco, United States.

Brion, M., Jantzen, J. C. & Rouquier, R. (Eds.) (2007). Algebraic Groups. Oberwolfach Reports, (2), 1191–1242. https://doi.org/10.4171/OWR/2007/22

Jensen, A. N. (2007). Algorithmic Aspects of Gröbner Fans and Tropical Varieties. Department of Mathematical Sciences , University of Aarhus.

Arge, L., Hoffmann, M. & Welzl, E. (Eds.) (2007). Algorithms - ESA 2007: 15th Annual European Symposium, Eilat, Israel, October 8-10, 2007. Proceedings. Springer. Lecture Notes in Computer Science Vol. 4698 https://doi.org/10.1007/978-3-540-75520-3

Kumarappan, V., Viftrup, S., Holmegaard, L., Bisgaard, C. & Stapelfeldt, H. (2007). Aligning molecules with long or short laser pulses. Physica Scripta, 76, C63-C68.

Kjeldsen, T. K. & Madsen, L. B. (2007). Alignment-dependent above-threshold ionization of molecules. J. Phys. B: At. Mol. Opt. Phys., 40, 237-245.

Zhan, Y. Q., Bergenti, I., Hueso, L. E., Dediu, V., de Jong, M. P. & Li, Z. (2007). Alignment of energy levels at the Alq3/La0.7Sr0.3MnO3 interface for organic spintronic devices. Physical Review B, 76, 045406.

Brodal, G. S. & Jørgensen, A. G. (2007). A Linear Time Algorithm for the k Maximal Sums Problem. In L. Kucera & A. Kucera (Eds.), Mathematical Foundations of Computer Science 2007: 32nd International Symposium, MFCS 2007 Ceský Krumlov, Czech Republic, August 26-31, 2007 Proceedings (pp. 442-453). Springer. https://doi.org/10.1007/978-3-540-74456-6_40

Nielsen, C. K. & Keiding, S. R. (2007). All-fiber mode-locked fiber laser. Optics Letters, 32(11), 1474-76.

Jeppesen, H. B., Byskov, J., Wright, P., Correia, J. G., Fraile, L. M., Fynbo, H. O. U., Johnston, K. & Riisager, K. (2007). Alpha-decay half-life of ²²¹Fr in different environments. The European Physical Journal A: Hadrons and Nuclei, 32, 31-34.

Zinner, N. T. (2007). Alpha Decay Rate Enhancement in Metals: An Unlikely Scenario. Nuclear Physics A, 781(1-2), 81 -87.

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