Publications

Follow the latest publications from the Faculty of Natural Sciences.

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Gaspar, H. A., Gerring, Z., Hübel, C., Middeldorp, C. M., Derks, E. M., Breen, G. & Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium (2019). Using genetic drug-target networks to develop new drug hypotheses for major depressive disorder. Translational Psychiatry, 9(1), Article 117. https://doi.org/10.1038/s41398-019-0451-4

Schøn, M. L., Jensen, K., Schow-Madsen, M., Gold, M., Mathys, A., Schou, T. M., Berggreen, I. E., Nørgaard, J. V. & Overgaard, J. (2026). Using gas exchange measurements to monitor growth, energy expenditure, and body composition of black soldier fly larvae (Hermetia illucens) on diets varying in protein-to-carbohydrate ratio. Journal of Insect Physiology, 170, Article 104961. https://doi.org/10.1016/j.jinsphys.2026.104961

Allen, K., Brändle, F., Botvinick, M., Fan, J. E., Gershman, S. J., Gopnik, A., Griffiths, T. L., Hartshorne, J. K., Hauser, T. U., Ho, M. K., de Leeuw, J. R., Ma, W. J., Murayama, K., Nelson, J. D., van Opheusden, B., Pouncy, T., Rafner, J., Rahwan, I., Rutledge, R. B. ... Schulz, E. (2024). Using games to understand the mind. Nature Human Behaviour, 8(6), 1035-1043. https://doi.org/10.1038/s41562-024-01878-9

Lassen, K. B. (2008). Using Formal Behavioral Modelsin Software Development:From Real-World Problems to Software Systems. Aarhus Universitetsforlag.

Chaves, P. P., Reategui Echeverri, N., Ruokolainen, K., Kalliola, R., Van Doninck, J., Gomez Rivero, E., Zuquim, G. & Tuomisto, H. (2021). Using forestry inventories and satellite imagery to assess floristic variation in bamboo-dominated forests in Peruvian Amazonia. Journal of Vegetation Science, 32(1), Article e12938. https://doi.org/10.1111/jvs.12938

Andersen, M. S., Kjærgaard, M. B. & Grønbæk, K. (2012). Using Extracted Behavioral Features to Improve Privacy for Shared Route Tracks. In A. U. Schmidt, G. Russello, I. Krontiris & S. Lian (Eds.), Security and Privacy in Mobile Information and Communication Systems : 4th International Conference, MobiSec 2012, Frankfurt am Main, Germany, June 25-26, 2012, Revised Selected Papers (pp. 107-118). Springer. https://doi.org/10.1007/978-3-642-33392-7_12

Jønsson, K. A., Thomassen, E. E., Iova, B., Sam, K. & Thomsen, P. F. (2023). Using environmental DNA to investigate avian interactions with flowering plants. Environmental DNA, 5(3), 462-475. https://doi.org/10.1002/edn3.393

Pfaehler, E., Krieger, L., Assent, I., Nebelung, S., Zwanenburg, A. & Truhn, D. (2025). Using ensemble radiomic models to identify uncertainty in lung nodule classifications. European Journal of Radiology Artificial Intelligence, 4, Article 100047. https://doi.org/10.1016/j.ejrai.2025.100047

Sparta, M., Hansen, M. B., Gras, E. M., Toffoli, D. & Christiansen, O. (2010). Using Electronic Energy Derivative Information in Automated Potential Energy Surface Construction for Vibrational Calculations. Journal of Chemical Theory and Computation, 6, 3162-3175.

Du, J. J., Stanton, S. A., Williams, P. A., Ong, J. A., Groundwater, P. W., Overgaard, J., Platts, J. A. & Hibbs, D. E. (2018). Using Electron Density to Predict Synthon Formation in a 4‑Hydroxybenzoic Acid: 4,4′-Bipyridine Cocrystal. Crystal Growth & Design, 18(3), 1786-1798. https://doi.org/10.1021/acs.cgd.7b01676

Barr, I. D., Adamson, K., Lane, T. P., Nebel, K. & van der Bilt, W. GM. (2024). Using drones to map and visualise glacial landscapes. In J. Meneely (Ed.), 3D Imaging of the Environment (pp. 45-55). CRC Press.

Wich, S. A., Bonnin, N., Hutschenreiter, A., Piel, A. K., Chitayat, A., Stewart, F. A., Pintea, L. & Kerby, J. T. (2023). Using Drones to Determine Chimpanzee Absences at the Edge of Their Distribution in Western Tanzania. Remote Sensing, 15(8), Article 2019. https://doi.org/10.3390/rs15082019

Greve, M. H., Bou Kheir, R., Greve, M. B. & Bøcher, P. K. (2012). Using digital elevation models as an environmental predictor for soil clay contents. Soil Science Society of America Journal, 76(6), 2116-2127. https://doi.org/10.2136/sssaj2010.0354

Hansen, M. B., Jespersen, S. N., Leighland, L. & Kroenke, C. (2013). Using diffusion anisotropy to characterize neuronal morphology in gray matter: the orientation distribution of axons and dendrites in the NeuroMorpho.org database. Frontiers in Integrative Neuroscience, 7.

Madsen, R. B., Jensen, M. M., Mørup, A., Houlberg, K., Sigaard Christensen, P., Klemmer, M., Becker, J., Iversen, B. B. & Glasius, M. (2016). Using design of experiments to optimize derivatization with methyl chloroformate for quantitative analysis of the aqueous phase from hydrothermal liquefaction of biomass. Analytical and Bioanalytical Chemistry, 408(8), 2171-2183. https://doi.org/10.1007/s00216-016-9321-6

Lehmann, A. & Gross, A. (2016). Using Crowd Sensed Data as Input to Congestion Model. In 2016 IEEE International Conference on Pervasive Computing and Communication Workshops, PerCom Workshops 2016: The Third International Workshop on Crowd Assisted Sensing Pervasive Systems and Communications Article 7457105 IEEE Press. https://doi.org/10.1109/PERCOMW.2016.7457105

Čermák, J., Bosansky, B., Durkota, K., Lisý, V. & Kiekintveld, C. (2016). Using correlated strategies for computing stackelberg equilibria in extensive-form games. In 30th AAAI Conference on Artificial Intelligence, AAAI 2016 (pp. 439-445). AAAI Press. https://www.scopus.com/inward/record.uri?eid=2-s2.0-85007242893&partnerID=40&md5=d6d209b2094ebcd4dd19608badb7e971

Madsen, O. L. (2021). Using Coroutines for Multi-core Preemptive Scheduling. In Proceedings of the 11th Workshop on Programming Languages and Operating Systems (PLOS '21) (pp. 46-52). Association for Computing Machinery. https://doi.org/10.1145/3477113.3487271

Choi, E., Buck, W. R., Lavier, L. L. & Petersen, K. D. (2013). Using core complex geometry to constrain fault strength. Geophysical Research Letters, 40(15), 3863-3867. https://doi.org/10.1002/grl.50732

Bjælde, O. E. & Lindberg, A. B. (2018). Using continuous assessment with feedback loops to generate useful data for learning analytics. In M. Campbell, J. Willems, C. Adachi, D. Blake, I. Doherty, S. Krishnan, S. Macfarlane, L. Ngo, M. O’Donnell, S. Palmer, L. Riddell, I. Story, H. Suri & J. Tai (Eds.), Open Oceans: Learning without borders. Proceedings ASCILITE 2018 Geelong (pp. 53-62). ASCILITE . https://ascilite.org/wp-content/uploads/2018/12/ASCILITE-2018-Proceedings.pdf

Zhang, W. & Hansen, K. M. (2011). Using Context Awareness for Self Management in Pervasive Service Middleware. In F. Mastrogiovanni & N.-Y. Chong (Eds.), Handbook of Research on Ambient Intelligence and Smart Environments Trends and Perspectives (pp. 248-271). Idea Group Publishing. http://www.igi-global.com/book/handbook-research-ambient-intelligence-smart/41775#table-of-contents

Kristensen, L. M. (2004). Using Coloured Petri Nets in the Development of Protocols for Ad-Hoc Networking. In Proceedings of 3rd International Workshop on Integration and Specification Techniques for Applications in Engineering (pp. 12-13)

Mailund, T., Halager, A. E. & Westergaard, M. (2012). Using colored Petri nets to construct coalescent hidden markov models: Automatic translation from demographic specifications to efficient inference methods. Lecture Notes in Computer Science, 7347, 32-50. https://doi.org/10.1007/978-3-642-31131-4_3

Hollensen, A. K., Sørensen, M. H., Thomsen, S. V., Thomsen, H. S. & Damgaard, C. K. (2025). Using circular RNAs to target toxic RNA-binding proteins in amyotrophic lateral sclerosis. Molecular Therapy Methods and Clinical Development, 33(3), Article 101525. https://doi.org/10.1016/j.omtm.2025.101525

Radaelli, L., Moses, Y. & Jensen, C. S. (2014). Using cameras to improve Wi-Fi based indoor positioning. In D. Pfoser & K.-J. Li (Eds.), Web and Wireless Geographical Information Systems: 13th International Symposium, W2GIS 2014, Seoul, South Korea, May 29-30, 2014. Proceedings (pp. 166-183). Springer VS. https://doi.org/10.1007/978-3-642-55334-9-11

Hsu, Y. H. H., Pintacuda, G., Liu, R., Nacu, E., Kim, A., Tsafou, K., Petrossian, N., Crotty, W., Suh, J. M., Riseman, J., Martin, J. M., Biagini, J. C., Mena, D., Ching, J. K. T., Malolepsza, E., Li, T., Singh, T., Ge, T., Egri, S. B. ... Wellcome Trust Case Control Consortium (2023). Using brain cell-type-specific protein interactomes to interpret neurodevelopmental genetic signals in schizophrenia. iScience, 26(5), Article 106701. https://doi.org/10.1016/j.isci.2023.106701

Emily, M., Mailund, T., Hein, J., Schauser, L. & Schierup, M. H. (2009). Using biological networks to search for interacting loci in genomewide association studies. European Journal of Human Genetics. https://doi.org/10.1038/ejhg.2009.15

Enni, S. & Assent, I. (2018). Using Balancing Terms to Avoid Discrimination in Classification. In 2018 IEEE International Conference on Data Mining, ICDM 2018 (pp. 947-952). Article 8594925 IEEE Press. https://doi.org/10.1109/ICDM.2018.00116

Danielsen, K. & Sørensen, H. K. (2015). Using authentic sources in teaching logistic growth: A narrative design perspective. In History and Epistemology in Mathematics Education. Proceedings of the Seventh European Summer University (pp. 499-510). Danish School of Education, Aarhus University.

Miller, P. J. O., Johnson, M. P., Madsen, P. T., Biassoni, N., Quero, M. & Tyack, P. L. (2009). Using at-sea experiments to study the effects of airguns on the foraging behavior of sperm whales in the Gulf of Mexico. Deep-Sea Research Part I: Oceanographic Research Papers, 56, 1168-1181. https://doi.org/10.1016/j.dsr.2009.02.008

Jensen, F. (2022). Using atomic charges to model molecular polarization. Physical Chemistry Chemical Physics, 24(4), 1926-1943. https://doi.org/10.1039/d1cp03542h

Carter, A. B., Braun, J., Bodenstein, T., Pfleger, R. F., Schulze, M., Kriese, T., Habermann, S. F. M., Liu, D., Al-Kahtani, A. A., Moreno-Pineda, E., Anson, C. E., Wernsdorfer, W., Chibotaru, L. F., Fink, K. & Powell, A. K. (2025). Using a Radical Straitjacket to Enforce an Ultrashort Dy–Dy Distance and Thus Enhance Dipolar Interactions in a Dy^III₂Dimer. Inorganic Chemistry, 64(51), 25036-25043. https://doi.org/10.1021/acs.inorgchem.5c04406

Nielsen, C. (2012). Using antibodies for targeted delivery of small interfering RNA. Aarhus University, Faculty of Science and Technology.

Alsos, I. G., Boussange, V., Rijal, D. P., Beaulieu, M., Brown, A. G., Herzschuh, U., Svenning, J. C. & Pellissier, L. (2024). Using ancient sedimentary DNA to forecast ecosystem trajectories under climate change. Philosophical Transactions of the Royal Society B: Biological Sciences, 379(1902), Article 20230017. https://doi.org/10.1098/rstb.2023.0017

Grønbæk, K., Bang, T. & Hansen, P. S. (2002). Using a Metro Map Metaphor for organizing Web-based learning resources. In P. Barker & S. Rebelsky (Eds.), Proceedings of World Conference on Educational Multimedia, Hypermedia and Telecommunications 2002 (pp. 647-652). Association for the Advancement of Computing in Education.

Ceccato, M., Bousquet, A., Hinge, M., Pedersen, S. U. & Daasbjerg, K. (2011). Using a Mediating Effect in the Electroreduction of Aryldiazonium Salts To Prepare Conducting Organic Films of High Thickness. Chemistry of Materials, 23, 1551-1557.

Zimmer, P. (2004). Using Ambients to Control Resources. International Journal of Information Security, 2(3-4), 126-144.

Malmos, K., Dong, M., Pillai, S., Kingshott, P., Besenbacher, F., Pedersen, S. U. & Daasbjerg, K. (2009). Using a hydrazone-protected benzenediazonium salt to introduce a near-monolayer of benzaldehyde on glassy carbon surfaces. Journal of the American Chemical Society, 131(13), 4928-36. https://doi.org/10.1021/ja809816x

Byrne, S., Panitz, F., Bendixen, C., Studer, B., Jensen, C. & Asp, T. (2012). Using a genotype by sequencing approach to estimate the extent of LD in a perennial ryegrass association population. Abstract from 7th International Symposium on Molecular Breeding of Forage and Turf (MBFT 2012), Salt Lake City, Utah, United States. http://mbft.usu.edu/ProgramDetails.cfm?abid=98

Bjergbæk, L., Jensen, S., Westergaard, O. & Andersen, A. H. (1999). Using a biochemical approach to identify the primary dimerization regions in human DNA topoisomerase IIα. Journal of Biological Chemistry, 274, 26529-26536.

Kristensen, K. & Rasmussen, I. A. (1997). Using a Bayesian Network for setting up a Decision Support for effect of Fungal Diseases in Malting Barley. In Abstracts of the XXVII International Biometrical Colloquium (pp. 24-25). The Polish Biometric Society.

Mosumgaard, J. R. (2018). Using 3D hydrodynamics simulations on-the-fly for stellar evolution calculations. Abstract from The TASC4/KASC11 Workshop, Aarhus, Denmark.

Foldager, L. (2000). Usikkerhed på optimal kvælstofmængde - variansanalyse.

Foldager, L. (2001). Usikkerhed på optimal kvælstofmængde - Bootstrap metoder.

Hansen, T. R., Eriksson, E. & Lykke-Olesen, A. (2006). Use your head: Exploring face tracking for mobile interaction. In G. M. Olson & R. Jeffries (Eds.), CHI Extended Abstracts ´06: Extended Abstracts Proceedings of the 2006 Conference on Human Factors in Computing Systems Society for Industrial and Applied Mathematics. https://doi.org/10.1145/1125451.1125617

Eerikson, H., Keller, M., Orlandi, C., Pullonen, P., Puura, J. & Simkin, M. (2020). Use your brain! Arithmetic 3PC for any modulus with active security. In Y. T. Kalai, A. D. Smith & D. Wichs (Eds.), 1st Conference on Information-Theoretic Cryptography (ITC 2020) Article 5 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ITC.2020.5

Hübschmann, L., Kvist, L. P., Grandez, C. & Balslev, H. (2007). Uses of vara casha - a neotropical liana palm, Desmoncus polyacanthos - in Iquitos, Peru. Palms, 51(4), 167-176.

Bødker, S. & Grønbæk, K. (1995). Users and Designers in Mutual Activity - an analysis of cooperative activities in systems design. In Y. Engeström & D. Middleton (Eds.), Cognition and communication at work (pp. 130-158). Cambridge University Press.

Kyng, M. (1998). Users and Computers: A contextual approach to design of computer artifact. Scandinavian Journal of Information Systems, 10(1-2), 7-44.

Seinfeld, S., Feuchtner, T., Maselli, A. & Müller, J. (2021). User Representations in Human-Computer Interaction. Human-Computer Interaction, 36(5-6), 400-438. https://doi.org/10.1080/07370024.2020.1724790

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